RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PDE10AQ9Y233 779 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ASXL1Q8IXJ9 1541 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ICE1Q9Y2F5 2266 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF705FA8MVS1 300 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF705DP0CH99 300 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF705BP0CI00 300 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 VAMP3Q15836 100 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ALKBH5Q6P6C2 394 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 NUDT13Q86X67 352 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR4N5Q8IXE1 308 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR13G1Q8NGZ3 307 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF566Q969W8 418 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB39BQ96DA2 213 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRKD2Q9BZL6 878 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KCNF1Q9H3M0 494 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR2S2Q9NQN1 319 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CNOT7Q9UIV1 285 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 MFHAS1Q9Y4C4 1052 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TDRD6O60522 2096 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 AURKAO14965 403 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 BCAS1O75363 584 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 MMP7P09237 267 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR13C7P0DN81 318 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC15A1P46059 708 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TNFAIP1Q13829 316 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KIAA0141Q14154 515 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMEM44Q2T9K0 475 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 GDPD4Q6W3E5 623 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ARHGAP27Q6ZUM4 889 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 GPR155Q7Z3F1 870 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HSD17B11Q8NBQ5 300 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HPSE2Q8WWQ2 592 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 FEM1CQ96JP0 617 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CNOT6LQ96LI5 555 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 RHOFQ9HBH0 211 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF510Q9Y2H8 683 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRPS2P11908 318 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 GLUD2P49448 558 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 FASTKQ14296 549 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CTC1Q2NKJ3 1217 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SAPCD1Q5SSQ6 148 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 VARS2Q5ST30 1063 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HES3Q5TGS1 186 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 RBM43Q6ZSC3 357 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CDH26Q8IXH8 852 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KCTD14Q9BQ13 255 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 C11orf70Q9BRQ4 267 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMPRSS5Q9H3S3 457 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 COMMD3Q9UBI1 195 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 DHRS7Q9Y394 339 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KDRP35968 1356 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PDHXO00330 501 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HCN1O60741 890 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PTTG1O95997 202 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TGFB1P01137 390 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TGFB3P10600 412 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CD8BP10966 210 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 NDUFA6P56556 154 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 MLF1P58340 268 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 DMWDQ09019 674 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ANKRD22Q5VYY1 191 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 UQCC3Q6UW78 93 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TRMT11Q7Z4G4 463 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 NPAS4Q8IUM7 802 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZSWIM2Q8NEG5 633 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PHF10Q8WUB8 498 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 MITD1Q8WV92 249 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SMARCD2Q92925 531 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 TATDN2Q93075 761 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ELF4Q99607 663 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF536O15090 1300 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PP64 1363 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PARD3Q8TEW0 1356 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRRC2BQ5JSZ5 2229 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADGRB3O60242 1522 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ASB14A6NK59 587 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CPNE3O75131 537 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 F7P08709 466 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 HLA-EP13747 358 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CHN1P15882 459 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 UBA1P22314 1058 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 MLLT10P55197 1068 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CYCSP99999 105 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SNTA1Q13424 505 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 BTBD16Q32M84 506 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 XKR6Q5GH73 641 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SUMF1Q8NBK3 374 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 PLBD2Q8NHP8 589 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ITFG1Q8TB96 612 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 NOL4LQ96MY1 436 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 FOPNLQ96NB1 174 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 CITED1Q99966 193 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 KLQ9UEF7 1012 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 SAMD4AQ9UPU9 718 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 NCKAP5O14513 1909 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 RALGAPA1Q6GYQ0 2036 aa6.01□□□□□ -1.45
CDC42BPA-201ENST00000334218 ARHGAP32A7KAX9 2087 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms