RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ILVBLA1L0T0 632 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 OR7A17O14581 309 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 SNAP29O95721 258 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 MLYCDO95822 493 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 GUCA1CO95843 209 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 PSMA3P25788 255 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 RFC2P35250 354 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 GDF5P43026 501 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 KPNA1P52294 538 aaPredicted RBP13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 ABRAXAS2Q15018 415 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 TTC33Q6PID6 262 aaPredicted RBP13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 DLEU7Q6UYE1 221 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 LPCAT2Q7L5N7 544 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 ARHGAP22Q7Z5H3 698 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 SPRED1Q7Z699 444 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 LKAAEAR1Q8TD35 194 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 TTPALQ9BTX7 342 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 TRIM15Q9C019 465 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 HACD3Q9P035 362 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 PLXNA4Q9HCM2 1894 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 PIKFYVEQ9Y2I7 2098 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 CHEK2O96017 543 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 HMGA1P17096 107 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 MYF6P23409 242 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 VARSP26640 1264 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 GKP32189 559 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 GGT5P36269 586 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 YAP1P46937 504 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 SBSNQ6UWP8 590 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 LYSMD3Q7Z3D4 306 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 OR4F6Q8NGB9 312 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 KCNJ9Q92806 393 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 NUSAP1Q9BXS6 441 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 NSUN3Q9H649 340 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 LEF1Q9UJU2 399 aaPredicted RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 SLC8A2Q9UPR5 921 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 ST14Q9Y5Y6 855 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 RASAL1O95294 804 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 PCNAP12004 261 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 FOXM1Q08050 763 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 ATP6AP1LQ52LC2 224 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 HECTD3Q5T447 861 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 TXNDC11Q6PKC3 985 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 WFDC5Q8TCV5 224 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 ISG20Q96AZ6 181 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 P2RY12Q9H244 342 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 IL17CQ9P0M4 197 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 CDC14AQ9UNH5 594 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 THSD7BQ9C0I4 1608 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 GOLGA8CPA6NN73 597 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 A8MX80 341 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 GIPC1O14908 333 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 SH3BP5O60239 455 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 ADRM1Q16186 407 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 PDCD4Q53EL6 469 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 TMEM214Q6NUQ4 689 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 FAM151BQ6UXP7 276 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 GOLGA7Q7Z5G4 137 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 ZNF382Q96SR6 550 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 C9orf16Q9BUW7 83 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 CHID1Q9BWS9 393 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 TM6SF2Q9BZW4 377 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 FARSBQ9NSD9 589 aaKnown RBP13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 PRSS21Q9Y6M0 314 aa13.24□□□□□ -0.29
TUBA1B-201ENST00000332858 A0A1B0GVM2 712 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 A0A1W2PQ45 241 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 A0A1W2PQY0 241 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 GPIP06744 558 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 CDK9P50750 372 aaKnown RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 SEMG2Q02383 582 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 EMX2Q04743 252 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 PTGR1Q14914 329 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 OTUD3Q5T2D3 398 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ADGRF1Q5T601 910 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ACBD5Q5T8D3 534 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 NCEH1Q6PIU2 408 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ZFAND4Q86XD8 727 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 DTWD1Q8N5C7 304 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 PACRGLQ8N7B6 248 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 TSPEARQ8WU66 669 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 EZH1Q92800 747 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 VPS50Q96JG6 964 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ADGRE3Q9BY15 652 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ATXN10Q9UBB4 475 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 LHX3Q9UBR4 397 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 SUN2Q9UH99 717 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ANAPC2Q9UJX6 822 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 FADS3Q9Y5Q0 445 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 NUP214P35658 2090 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 FAM234BA2RU67 622 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms