RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 CEP112Q8N8E3 955 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 NOA1Q8NC60 698 aaKnown RBP15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 OR6C4Q8NGE1 309 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 MAPK15Q8TD08 544 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 CCDC74AQ96AQ1 378 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 EBNA1BP2Q99848 306 aaKnown RBP15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 PRSS21Q9Y6M0 314 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 RNF215Q9Y6U7 377 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 CACNA1AO00555 2505 aa15.62■□□□□ 0.09
CCDC28A-201ENST00000332797 A6NCN8 305 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 MGAT4DA6NG13 374 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 PRR19A6NJB7 356 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 DKK1O94907 266 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 TRIM16O95361 564 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 GP1BAP07359 652 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 GLB1P16278 677 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 DMPKQ09013 629 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 THOC5Q13769 683 aaKnown RBP15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 CRYMQ14894 314 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 LONRF1Q17RB8 773 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 NEPROQ6NW34 567 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 SDCCAG8Q86SQ7 713 aaPredicted RBP15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 C17orf82Q86X59 251 aaPredicted RBP15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 ANKMY2Q8IV38 441 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 IGDCC3Q8IVU1 814 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 SFRP1Q8N474 314 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 CHCHD4Q8N4Q1 142 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 OR2L2Q8NH16 312 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 SLC37A2Q8TED4 501 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 ADAMTS14Q8WXS8 1223 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 CFAP36Q96G28 342 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 LINC00615Q96LM1 132 aaPredicted RBP15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 CCDC3Q9BQI4 270 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 NAT9Q9BTE0 207 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 VPS37BQ9H9H4 285 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 C20orf96Q9NUD7 363 aaPredicted RBP15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 LRIT1Q9P2V4 623 aa15.61■□□□□ 0.09
CCDC28A-201ENST00000332797 ARHGEF17Q96PE2 2063 aaPredicted RBP15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 ESYT3A0FGR9 886 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 RHPN2P1A8MT19 583 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 QSOX1O00391 747 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 NDUFS3O75489 264 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 TTC4O95801 387 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 ADRB1P08588 477 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 OR56A5P0C7T3 313 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 CDK4P11802 303 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 PLTPP55058 493 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 PDIA2Q13087 525 aaKnown RBP15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 TRADDQ15628 312 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 ZNF470Q6ECI4 717 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 IYDQ6PHW0 289 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 GPR150Q8NGU9 434 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 HM13Q8TCT9 377 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 LRRC39Q96DD0 335 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 WDR83Q9BRX9 315 aaKnown RBP15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 CCM2Q9BSQ5 444 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 CARD6Q9BX69 1037 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 ABCG4Q9H172 646 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 SYNDIG1Q9H7V2 258 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 SCHIP1Q9P0W5 487 aaPredicted RBP15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 ZC3H7BQ9UGR2 993 aaKnown RBP15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 RABGEF1Q9UJ41 708 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 PSMD13Q9UNM6 376 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 FAM169AQ9Y6X4 670 aa15.6■□□□□ 0.09
CCDC28A-201ENST00000332797 UBA6A0AVT1 1052 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 MED19A0JLT2 244 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 KLHL33A6NCF5 533 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 OR5K4A6NMS3 321 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 NUDT21O43809 227 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 OPA1O60313 960 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 TOP3BO95985 862 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 FTH1P02794 183 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 OGNP20774 298 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CLDN6P56747 220 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 E2F1Q01094 437 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 GUCY2DQ02846 1103 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CAV1Q03135 178 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 TYSND1Q2T9J0 566 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 SPANXN3Q5MJ09 141 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 AGAP9Q5VTM2 703 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CENPUQ71F23 418 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 RAB44Q7Z6P3 723 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 KCNMB4Q86W47 210 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CCNJLQ8IV13 435 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CFAP206Q8IYR0 622 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 UNC5BQ8IZJ1 945 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 Q8N9G6 341 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 FBXO36Q8NEA4 188 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 ART4Q93070 314 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 STN1Q9H668 368 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 WDR37Q9Y2I8 494 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 TEX264Q9Y6I9 313 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 GOLGA4Q13439 2230 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 SPTBN2O15020 2390 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 KIR2DS5A0A0G2JLQ3 304 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 A0A0G2JNG1 304 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 OR52A4PA6NMU1 304 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 F8W8V4 182 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 KIR2DS3K7RE56 304 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms