RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 VPS18Q9P253 973 aa14.46□□□□□ -0.09
CTHRC1-201ENST00000330295 PCM1Q15154 2024 aa14.46□□□□□ -0.1
CTHRC1-201ENST00000330295 DOCK10Q96BY6 2186 aa14.46□□□□□ -0.1
CTHRC1-201ENST00000330295 MASP2O00187 686 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 PEX12O00623 359 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 MMP8P22894 467 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 SLC19A1P41440 591 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 ARL4DP49703 201 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 SMSP52788 366 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 NR1I3Q14994 352 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 TLR1Q15399 786 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 IGFL2Q6UWQ7 119 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 MEX3BQ6ZN04 569 aaKnown RBP14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 ARCQ7LC44 396 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 TECPR1Q7Z6L1 1165 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 PHYKPLQ8IUZ5 450 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 NR4A3Q92570 626 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 NSMCE3Q96MG7 304 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 GBP5Q96PP8 586 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 ABCG8Q9H221 673 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 ZNF624Q9P2J8 865 aaPredicted RBP14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 TNFRSF10DQ9UBN6 386 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 CD84Q9UIB8 345 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 PADI2Q9Y2J8 665 aa14.45□□□□□ -0.1
CTHRC1-201ENST00000330295 WASH4PA8MWX3 477 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 J3KR12 359 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 CBFA2T2O43439 604 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 ATP1A1P05023 1023 aaKnown RBP14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 CYP2A6P11509 494 aaPredicted RBP14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 CHRNB2P17787 502 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 HADHAP40939 763 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 ATP11AP98196 1134 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 SSPNQ14714 243 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 GPR19Q15760 415 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 CLEC16AQ2KHT3 1053 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 RAB6CQ53S08 254 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 FIGNQ5HY92 759 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 PRAMEF17Q5VTA0 474 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 RPUSD3Q6P087 351 aaKnown RBP14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 RFLNAQ6ZTI6 216 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 BIVMQ86UB2 503 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 KMT5CQ86Y97 462 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 SYTL1Q8IYJ3 562 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 D2HGDHQ8N465 521 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 SLC30A5Q8TAD4 765 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 SCAMP4Q969E2 229 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 CLIP3Q96DZ5 547 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 TREX2Q9BQ50 279 aaPredicted RBP14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 C11orf70Q9BRQ4 267 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 RAB6CQ9H0N0 254 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 P4HTMQ9NXG6 502 aa14.44□□□□□ -0.1
CTHRC1-201ENST00000330295 ATRQ13535 2644 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 CCDC78A2IDD5 438 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 LDB2O43679 373 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 PYGLP06737 847 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 KRT3P12035 628 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 SDC4P31431 198 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 HSD11B2P80365 405 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 KLHL30Q0D2K2 578 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 PRKD1Q15139 912 aaPredicted RBP14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 TSPAN33Q86UF1 283 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 PHF13Q86YI8 300 aaPredicted RBP14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 EXD1Q8NHP7 514 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 AGAP2Q99490 1192 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 MAP3K3Q99759 626 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 TMEM121Q9BTD3 319 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 DHRS4Q9BTZ2 278 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 SELENOOQ9BVL4 669 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 OSGEPL1Q9H4B0 414 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 ATP13A2Q9NQ11 1180 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 POT1Q9NUX5 634 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 PCMTD2Q9NV79 361 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 AIPL1Q9NZN9 384 aa14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 BZW2Q9Y6E2 419 aaKnown RBP14.43□□□□□ -0.1
CTHRC1-201ENST00000330295 CCDC88CQ9P219 2028 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 AKAP6Q13023 2319 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 NPIPB15A6NHN6 443 aaPredicted RBP14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 LRRC53A6NM62 1247 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 C9J4A7 227 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 PRAMEF11O60813 436 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 PALMO75781 387 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 KLF7O75840 302 aaPredicted RBP14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 UNC5CO95185 931 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 TPM1P09493 284 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 UNGP13051 313 aaPredicted RBP14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 EPHB2P29323 1055 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 SCNN1BP51168 640 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 CLCNKAP51800 687 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 AP1S1P61966 158 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 GPR18Q14330 331 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 NFKBIBQ15653 356 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 FAAH2Q6GMR7 532 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 ACAD10Q6JQN1 1059 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 DNAJC24Q6P3W2 148 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 IRF2BP2Q7Z5L9 587 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 UMODL1-AS1Q8N2C9 162 aa14.42□□□□□ -0.1
CTHRC1-201ENST00000330295 LRRN4CLQ8ND94 238 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms