RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 VPS9D1Q9Y2B5 631 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 POLR3HQ9Y535 204 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 A0A1B0GVM2 712 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 H7C4K7 107 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 TBL1XO60907 577 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 XKR7Q5GH72 579 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 DNAJC14Q6Y2X3 702 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 CLVS1Q8IUQ0 354 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 OR4F6Q8NGB9 312 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 EGFL8Q99944 293 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 HACD3Q9P035 362 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 SLC8A2Q9UPR5 921 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 EEDO75530 441 aaKnown RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 SEC24AO95486 1093 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 SNAP29O95721 258 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 CD160O95971 181 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 PRR35P0CG20 571 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 UGT1A1P22309 533 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 UGT1A4P22310 534 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 CA5AP35218 305 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 UGT1A3P35503 534 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 UGT1A5P35504 534 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 AP5B1Q2VPB7 878 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 RFTN2Q52LD8 501 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 TMEM214Q6NUQ4 689 aaKnown RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 FAM126BQ8IXS8 530 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 CHID1Q9BWS9 393 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 NUSAP1Q9BXS6 441 aaKnown RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 TRPM5Q9NZQ8 1165 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 PADI4Q9UM07 663 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 FADS3Q9Y5Q0 445 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 ANKRD36A6QL64 1941 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-201ENST00000320755 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 BNIP3LO60238 219 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 SLC2A4P14672 509 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 NFKBIAP25963 317 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 RPS6KA3P51812 740 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 SH3BGRP55822 239 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-201ENST00000320755 ABRAXAS2Q15018 415 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 PABPC1LQ4VXU2 614 aaKnown RBP17.18■□□□□ 0.34
COL9A1-201ENST00000320755 PYCR3Q53H96 274 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 GLYATQ6IB77 296 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 CXorf57Q6NSI4 855 aaKnown RBP17.18■□□□□ 0.34
COL9A1-201ENST00000320755 TTC30BQ8N4P2 665 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 KCNJ9Q92806 393 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 DCUN1D5Q9BTE7 237 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 IPPKQ9H8X2 491 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 THEGQ9P2T0 379 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 MAGED1Q9Y5V3 778 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-201ENST00000320755 TBC1D4O60343 1298 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 HMOX2P30519 316 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 ACBD5Q5T8D3 534 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-201ENST00000320755 TBPL2Q6SJ96 375 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 GOLGA7Q7Z5G4 137 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 ZFP14Q9HCL3 533 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 PFDN4Q9NQP4 134 aa17.18■□□□□ 0.34
COL9A1-201ENST00000320755 MOXD2PA6NHM9 499 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ACOX3O15254 700 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 RSL1D1O76021 490 aaKnown RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 LDLRP01130 860 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 GPIP06744 558 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 RFC2P35250 354 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 PTGER3P43115 390 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 PTGR1Q14914 329 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 TCTN1Q2MV58 587 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 C5orf22Q49AR2 442 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 INTS11Q5TA45 600 aaKnown RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 EFL1Q7Z2Z2 1120 aaKnown RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 MTFMTQ96DP5 389 aaKnown RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ANGPTL3Q9Y5C1 460 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 FAM234BA2RU67 622 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 PRMT5O14744 637 aaPredicted RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 KLK8O60259 260 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 S100BP04271 92 aaPredicted RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 SELPP16109 830 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 HRH2P25021 359 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 CLCN7P51798 805 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 GTF2H2Q13888 395 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 GTF2H2CQ6P1K8 395 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 CYP20A1Q6UW02 462 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 MILR1Q7Z6M3 343 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 DHRSXQ8N5I4 330 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 B4GALNT2Q8NHY0 566 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 SCLYQ96I15 445 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 NSMCE2Q96MF7 247 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 CLPBQ9H078 707 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 FARSBQ9NSD9 589 aaKnown RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ESR1P03372 595 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 RPL38P63173 70 aaKnown RBP17.17■□□□□ 0.34
COL9A1-201ENST00000320755 HMGCS1Q01581 520 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ATP6AP1Q15904 470 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 TMEM259Q4ZIN3 620 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 GPR141Q7Z602 305 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 SERPINA9Q86WD7 417 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ZNF382Q96SR6 550 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 BRINP2Q9C0B6 783 aa17.17■□□□□ 0.34
COL9A1-201ENST00000320755 ASB8Q9H765 288 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms