RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 HPCAL1P37235 193 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 IL10RBQ08334 325 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 GALNT2Q10471 571 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 RFX4Q33E94 735 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 INO80DQ53TQ3 878 aaPredicted RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 MS4A13Q5J8X5 152 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 SETD9Q8NE22 299 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 ACVR1CQ8NER5 493 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 HTRA1Q92743 480 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 ART5Q96L15 291 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 MARCH7Q9H992 704 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 FANCEQ9HB96 536 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 TMLHEQ9NVH6 421 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 KLHL20Q9Y2M5 609 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 FAM25AB3EWG3 89 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 FAM25CB3EWG5 89 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 FAM25GB3EWG6 89 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 MATN2O00339 956 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 AOC2O75106 756 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 GJB5O95377 273 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 CYP2A6P11509 494 aaPredicted RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 GLDCP23378 1020 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 SOX6P35712 828 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 INAQ16352 499 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 PARGQ86W56 976 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 POC5Q8NA72 575 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 FLCNQ8NFG4 579 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 PHF21AQ96BD5 680 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 ZHX1-C8orf76Q96EF9 292 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 GORASP1Q9BQQ3 440 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 RSPH9Q9H1X1 276 aaPredicted RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 GDAP2Q9NXN4 497 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 SMPD3Q9NY59 655 aaPredicted RBP16.29■□□□□ 0.2
CLIP4-201ENST00000320081 ARID1AO14497 2285 aa16.29■□□□□ 0.2
CLIP4-201ENST00000320081 ELOVL7A1L3X0 281 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 IFNA14P01570 189 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 NR2F1P10589 423 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 BUD31P41223 144 aaPredicted RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 SPANXN2Q5MJ10 180 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 EPHX4Q8IUS5 362 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 TBC1D21Q8IYX1 336 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ZBTB2Q8N680 514 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 TP53INP1Q96A56 240 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 PHLPP1O60346 1717 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 E7ESA3 106 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 GLUD1P00367 558 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 MAT2AP31153 395 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 PAFAH1B3Q15102 231 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 MSANTD2Q6P1R3 559 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 TXNDC11Q6PKC3 985 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 UXS1Q8NBZ7 420 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 AP2M1Q96CW1 435 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 EHD3Q9NZN3 535 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ITM2BQ9Y287 266 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ALDH1A2O94788 518 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ARSAP15289 507 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 AZGP1P25311 298 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 RPS6KA3P51812 740 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 NAA20P61599 178 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 MRPL28Q13084 256 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 GPR153Q6NV75 609 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 RAVER1Q8IY67 606 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 UBE2J2Q8N2K1 259 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 C7orf57Q8NEG2 295 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 OR10G6Q8NH81 332 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ZCCHC2Q9C0B9 1178 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 MAGEH1Q9H213 219 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 AHSPQ9NZD4 102 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 ISM1B1AKI9 464 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 H3BM21 787 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 GPR39O43194 453 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 EPS8Q12929 822 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 NOGQ13253 232 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 C1DQ13901 141 aaKnown RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 DNAJB7Q7Z6W7 309 aaPredicted RBP16.28■□□□□ 0.2
CLIP4-201ENST00000320081 LRRTM3Q86VH5 581 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 PIK3C3Q8NEB9 887 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 NUP205Q92621 2012 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 IGSF8Q969P0 613 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 GPR62Q9BZJ7 368 aa16.28■□□□□ 0.2
CLIP4-201ENST00000320081 KRT75O95678 551 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 INHAP05111 366 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 HPGDP15428 266 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 TNNI3P19429 210 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 AOC1P19801 751 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 EDNRBP24530 442 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 PCBP2Q15366 365 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLIP4-201ENST00000320081 CYP2A13Q16696 494 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 EPGNQ6UW88 154 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 PAGE2Q7Z2X7 111 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 CYP4Z1Q86W10 505 aa16.27■□□□□ 0.2
CLIP4-201ENST00000320081 FAM81AQ8TBF8 368 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms