RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 E2F3O00716 465 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 MATN3O15232 486 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 HTRA2O43464 458 aaPredicted RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 SPOPO43791 374 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 SNX2O60749 519 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 KRT1P04264 644 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 CCNCP24863 283 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 MAXP61244 160 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 GBE1Q04446 702 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 ART3Q13508 389 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 LRP8Q14114 963 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 VWA5B1Q5TIE3 1220 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 ALG1LQ6GMV1 187 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 Q6ZVL8 140 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 KCNMB4Q86W47 210 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 TMTC1Q8IUR5 882 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 ZNF295-AS1Q8N0V1 137 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 POLR1EQ9GZS1 481 aaKnown RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 NOD2Q9HC29 1040 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 AGPAT4Q9NRZ5 378 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 KCTD5Q9NXV2 234 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 DDX56Q9NY93 547 aaKnown RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 DTLQ9NZJ0 730 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 CPNE7Q9UBL6 633 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 KCNK6Q9Y257 313 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 KLF2Q9Y5W3 355 aaPredicted RBP12.96□□□□□ -0.33
SYCN-201ENST00000318438 SLC30A1Q9Y6M5 507 aa12.96□□□□□ -0.33
SYCN-201ENST00000318438 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 TOX3O15405 576 aaPredicted RBP12.95□□□□□ -0.34
SYCN-201ENST00000318438 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 PRICKLE3O43900 615 aaPredicted RBP12.95□□□□□ -0.34
SYCN-201ENST00000318438 HEXIM1O94992 359 aaKnown RBP12.95□□□□□ -0.34
SYCN-201ENST00000318438 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
SYCN-201ENST00000318438 SOD1P00441 154 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 COMTP21964 271 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 TUBB3Q13509 450 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 KCNAB1Q14722 419 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 PTPRRQ15256 657 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 LYPLAL1Q5VWZ2 237 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 RFLNAQ6ZTI6 216 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 CHST15Q7LFX5 561 aaPredicted RBP12.95□□□□□ -0.34
SYCN-201ENST00000318438 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 CUZD1Q86UP6 607 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 NXPE1Q8N323 547 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 MR1Q95460 341 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 NT5MQ9NPB1 228 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 C5AR2Q9P296 337 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 ZNHIT2Q9UHR6 403 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 SNX7Q9UNH6 387 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 PCDHGC4Q9Y5F7 938 aa12.95□□□□□ -0.34
SYCN-201ENST00000318438 EPN1Q9Y6I3 576 aaPredicted RBP12.95□□□□□ -0.34
SYCN-201ENST00000318438 TTC24A2A3L6 582 aaPredicted RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 APOL1O14791 398 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 UBXN7O94888 489 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 CPP00450 1065 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 FOLR1P15328 257 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 ZFXP17010 805 aaPredicted RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 BPIP17213 487 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 LHCGRP22888 699 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 TEAD1P28347 426 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 CDC25BP30305 580 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 VIPR1P32241 457 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 GPR1P46091 355 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 VAV2P52735 878 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 SLC10A2Q12908 348 aaPredicted RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 TRAF2Q12933 501 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 ATP1A4Q13733 1029 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 IHHQ14623 411 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 LLGL1Q15334 1064 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 CACHD1Q5VU97 1274 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 C11orf63Q6NUN7 778 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 FAM92BQ6ZTR7 304 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 MED25Q71SY5 747 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 PRSS42Q7Z5A4 293 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 TMEM102Q8N9M5 508 aaPredicted RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 ITLN2Q8WWU7 325 aaPredicted RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 KLHL6Q8WZ60 621 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 CALR3Q96L12 384 aaKnown RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 HERPUD2Q9BSE4 406 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 MAK16Q9BXY0 300 aaKnown RBP12.94□□□□□ -0.34
SYCN-201ENST00000318438 PDE7BQ9NP56 450 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 CD84Q9UIB8 345 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 RARRES3Q9UL19 164 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 ALG6Q9Y672 507 aa12.94□□□□□ -0.34
SYCN-201ENST00000318438 KIR2DS5A0A0G2JLQ3 304 aa12.93□□□□□ -0.34
SYCN-201ENST00000318438 A0A0G2JNG1 304 aa12.93□□□□□ -0.34
SYCN-201ENST00000318438 A0A0U1RQS6 177 aa12.93□□□□□ -0.34
SYCN-201ENST00000318438 KIR2DS3K7RE56 304 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms