RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RPAP1Q9BWH6 1393 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 LRRC72A6NJI9 287 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 KCNU1A8MYU2 1149 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 AKR1B15C9JRZ8 316 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 PLPP2O43688 288 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 PROP1O75360 226 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 IDH1O75874 414 aaKnown RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 DNASE1P24855 282 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 METAP2P50579 478 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 GPR143P51810 404 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF41P51814 821 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SELENOVP59797 346 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 MRPS34P82930 218 aaKnown RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 PPP2R2BQ00005 443 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 MYBPC2Q14324 1141 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 INPP5JQ15735 1006 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 DUSP6Q16828 381 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 CAVIN4Q5BKX8 364 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF805Q5CZA5 627 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 RARS2Q5T160 578 aaKnown RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SLC18B1Q6NT16 456 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SUSD1Q6UWL2 747 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 CCDC83Q8IWF9 413 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SPATA6LQ8N4H0 392 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TEX45Q8NA69 505 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TMEM174Q8WUU8 243 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 VCPIP1Q96JH7 1222 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF333Q96JL9 665 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 DESI2Q9BSY9 194 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 HAUS8Q9BT25 410 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ACSS1Q9NUB1 689 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 CRNNQ9UBG3 495 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ISY1Q9ULR0 285 aaKnown RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 PCDHA12Q9UN75 941 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 RAI2Q9Y5P3 530 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 MYH3P11055 1940 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TMEM272A0A1B0GTI8 110 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TRBC2A0A5B9 178 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 KDM4EB2RXH2 506 aaPredicted RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 E7EWF7 191 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 STX6O43752 255 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TLR2O60603 784 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 GJB2P29033 226 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ACVRL1P37023 503 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 INHBCP55103 352 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 RPS8P62241 208 aaKnown RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 GRSF1Q12849 480 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SCARB2Q14108 478 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 PNLIPRP3Q17RR3 467 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 KLHL40Q2TBA0 621 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 KRT79Q5XKE5 535 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TEX38Q6PEX7 206 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SLC16A12Q6ZSM3 486 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 PTF1AQ7RTS3 328 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 CTU1Q7Z7A3 348 aaKnown RBP4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ANKRD13BQ86YJ7 626 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 SCCPDHQ8NBX0 429 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 NSMCE1Q8WV22 266 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 INPP5DQ92835 1189 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ATP6V1E2Q96A05 226 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 GRAMD2BQ96HH9 432 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 FER1L6-AS2Q96M78 137 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 ADPGKQ9BRR6 497 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 OSGEPL1Q9H4B0 414 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 GRPEL1Q9HAV7 217 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 TMEM51Q9NW97 253 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 KIF3AQ9Y496 699 aa4.03□□□□□ -1.76
SMCO3-201ENST00000316048 COL5A3P25940 1745 aaPredicted RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 ATRNO75882 1429 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 RIC1Q4ADV7 1423 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 GPR75-ASB3A0A0A6YYF3 556 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 MDM4O15151 490 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 GPAA1O43292 621 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 RSL1D1O76021 490 aaKnown RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 MBD3O95983 291 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 MYZAPP0CAP1 466 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 SYT1P21579 422 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 MSH2P43246 934 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 ADORA2A-AS1P86434 159 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TFAP4Q01664 338 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 SLC10A2Q12908 348 aaPredicted RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TRDNQ13061 729 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 ALCAMQ13740 583 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 EFNB3Q15768 340 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 C6orf163Q5TEZ5 329 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TRAT1Q6PIZ9 186 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 DCLRE1AQ6PJP8 1040 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 Q6ZSV7 163 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TAOK1Q7L7X3 1001 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 RD3Q7Z3Z2 195 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 RBM15BQ8NDT2 890 aaKnown RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 NCOA7Q8NI08 942 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TRPC4APQ8TEL6 797 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 TEKT4Q8WW24 435 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 LPGAT1Q92604 370 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 RND1Q92730 232 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 LLPHQ9BRT6 129 aaKnown RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 PCED1AQ9H1Q7 454 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms