RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PDE10AQ9Y233 779 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 MRPS23Q9Y3D9 190 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 IL1R1P14778 569 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 LHFPL3Q86UP9 236 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 CPA6Q8N4T0 437 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 BTN2A3PQ96KV6 586 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 COL1A2P08123 1366 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 MAP2K7O14733 419 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SRCP12931 536 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 GNAZP19086 355 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 XKRXQ6PP77 449 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SLC43A3Q8NBI5 491 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 GFM1Q96RP9 751 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SLC39A3Q9BRY0 314 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 PCDHB16Q9NRJ7 776 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 PCDHGC3Q9UN70 934 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 GSC2O15499 205 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 CYP3A4P08684 503 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 MC4RP32245 332 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 AHSA2Q719I0 299 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 RPL36Q9Y3U8 105 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 M0R129 80 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 RPP40O75818 363 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 NTSR2O95665 410 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SLC9A9Q8IVB4 645 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 AVL9Q8NBF6 648 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 OR2L8Q8NGY9 312 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SLC22A17Q8WUG5 538 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 SLC35C1Q96A29 364 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 OTUB2Q96DC9 234 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF350Q9GZX5 532 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 LYARQ9NX58 379 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 C14orf166Q9Y224 244 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 USP12O75317 370 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 CLDN11O75508 207 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ACVR2AP27037 513 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 EPHX2P34913 555 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ABL2P42684 1182 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 MAPK12P53778 367 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 NXNL1Q96CM4 212 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ENY2Q9NPA8 101 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ERVW-1Q9UQF0 538 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 C5orf51A6NDU8 294 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 AP2S1P53680 142 aaPredicted RBP15.32■□□□□ 0.04
HCFC1-201ENST00000310441 TBX2Q13207 712 aaPredicted RBP15.32■□□□□ 0.04
HCFC1-201ENST00000310441 THAP6Q8TBB0 222 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 STYXQ8WUJ0 223 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 CREB3L1Q96BA8 519 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ELOVL2Q9NXB9 296 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ADAM15Q13444 863 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 HSDL1Q3SXM5 330 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 COLEC12Q5KU26 742 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 LINGO2Q7L985 606 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 C7orf26Q96N11 449 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 DUSP16Q9BY84 665 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 MRPS6P82932 125 aaKnown RBP15.32■□□□□ 0.04
HCFC1-201ENST00000310441 TIGD2Q4W5G0 525 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ADGRD2Q7Z7M1 963 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 DNAAF5Q86Y56 855 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 OR10H4Q8NGA5 316 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 HDAC10Q969S8 669 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 HHATLQ9HCP6 504 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 F8VP50 259 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 C8GP07360 202 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 POU5F1Q01860 360 aaKnown RBP15.32■□□□□ 0.04
HCFC1-201ENST00000310441 FKBP1CQ5VVH2 108 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 TUBGCP5Q96RT8 1024 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 RAB11FIP5Q9BXF6 653 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ULBP1Q9BZM6 244 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 DRD4P21917 467 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF132P52740 706 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 LCP2Q13094 533 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 C16orf46Q6P387 395 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 FAM151BQ6UXP7 276 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 EGFL7Q9UHF1 273 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF20P17024 532 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 CCNFP41002 786 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 RBM48Q5RL73 367 aaKnown RBP15.32■□□□□ 0.04
HCFC1-201ENST00000310441 KIAA1324Q6UXG2 1013 aaKnown RBP15.32■□□□□ 0.04
HCFC1-201ENST00000310441 SLC26A9Q7LBE3 791 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 TMEM199Q8N511 208 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 ABCD2Q9UBJ2 740 aa15.32■□□□□ 0.04
HCFC1-201ENST00000310441 FER1L6Q2WGJ9 1857 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 FABP12A6NFH5 140 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 SLITRK3O94933 977 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 ADORA2AP29274 412 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 GBX2P52951 348 aaPredicted RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 TMBIM6P55061 237 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 CDK18Q07002 472 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 DBIP07108 87 aaKnown RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 PRPS2P11908 318 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 MAPK3P27361 379 aaPredicted RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 TDRPQ86YL5 185 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 SETD6Q8TBK2 473 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 METTL8Q9H825 291 aaKnown RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 FBXO5Q9UKT4 447 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 AVPR1BP47901 424 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms