RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 THEGQ9P2T0 379 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 MBD1Q9UIS9 605 aaPredicted RBP22.2■■□□□ 1.15
IRF3-201ENST00000309877 KANSL1LA0AUZ9 987 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 NEMP2A6NFY4 417 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 SYCE1LA8MT33 242 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 ATG13O75143 517 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 CDK14O94921 469 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 PAK4O96013 591 aaPredicted RBP22.2■■□□□ 1.14
IRF3-201ENST00000309877 CBSLP0DN79 551 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 AOAHP28039 575 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 CBSP35520 551 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 STARD6P59095 220 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 OCRLQ01968 901 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 GTF2H3Q13889 308 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 NEK5Q6P3R8 708 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 TMEM220Q6QAJ8 160 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 PIWIL4Q7Z3Z4 852 aaKnown RBP22.2■■□□□ 1.14
IRF3-201ENST00000309877 SPATA21Q7Z572 469 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 TRIM74Q86UV6 250 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 HORMAD1Q86X24 394 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 SIX5Q8N196 739 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 SEC16BQ96JE7 1060 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 LENG8Q96PV6 779 aaPredicted RBP22.2■■□□□ 1.14
IRF3-201ENST00000309877 SLC17A9Q9BYT1 436 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 KDM4CQ9H3R0 1056 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 CYP4F12Q9HCS2 524 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 IKZF3Q9UKT9 509 aa22.2■■□□□ 1.14
IRF3-201ENST00000309877 FAM170BA6NMN3 283 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 A8MT66 165 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 TMEM114B3SHH9 223 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 SGTAO43765 313 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 SNX3O60493 162 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 IPO13O94829 963 aaKnown RBP22.19■■□□□ 1.14
IRF3-201ENST00000309877 TROVE2P10155 538 aaKnown RBP eCLIP22.19■■□□□ 1.141e-6■□□□□ 8.4
IRF3-201ENST00000309877 TPMTP51580 245 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 NAGLUP54802 743 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 DNAJB13P59910 316 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 ABCE1P61221 599 aaKnown RBP22.19■■□□□ 1.14
IRF3-201ENST00000309877 OVGP1Q12889 678 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 MAP7D1Q3KQU3 841 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 TMEM259Q4ZIN3 620 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 CGB2Q6NT52 195 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 SYT13Q7L8C5 426 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 CRLF3Q8IUI8 442 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 CACNA2D3Q8IZS8 1091 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 OR6Y1Q8NGX8 325 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 PPP4R1Q8TF05 950 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 ELMO1Q92556 727 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 ATOH8Q96SQ7 321 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 NELL2Q99435 816 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 OR2AG1Q9H205 316 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 ZNF395Q9H8N7 513 aaPredicted RBP22.19■■□□□ 1.14
IRF3-201ENST00000309877 LRRK1Q38SD2 2015 aa22.19■■□□□ 1.14
IRF3-201ENST00000309877 C19orf67A6NJJ6 358 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 SUPT3HB4E1H0 165 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 UBXN8O00124 270 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 ITM2AO43736 263 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 SUPT3HO75486 399 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 CTSCP53634 463 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 PLEKHS1Q5SXH7 462 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 ZNF771Q7L3S4 317 aaPredicted RBP22.18■■□□□ 1.14
IRF3-201ENST00000309877 ADGRG6Q86SQ4 1221 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 CCNYL1Q8N7R7 359 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 BEND7Q8N7W2 519 aaPredicted RBP22.18■■□□□ 1.14
IRF3-201ENST00000309877 FUBP1Q96AE4 644 aaKnown RBP22.18■■□□□ 1.14
IRF3-201ENST00000309877 PHF21BQ96EK2 531 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 EPHX3Q9H6B9 360 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 NCKIPSDQ9NZQ3 722 aa22.18■■□□□ 1.14
IRF3-201ENST00000309877 VEGFDO43915 354 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 LYPLA1O75608 230 aaPredicted RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 ENO3P13929 434 aaPredicted RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 GFAPP14136 432 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 PRLHRP49683 370 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 HSPA14Q0VDF9 509 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 BOP1Q14137 746 aaKnown RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 FGL2Q14314 439 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 IRF4Q15306 451 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 CFAP157Q5JU67 520 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 TRIM67Q6ZTA4 783 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 RAB44Q7Z6P3 723 aaPredicted RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 HEATR4Q86WZ0 1026 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 GPSM1Q86YR5 675 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 TP53I13Q8NBR0 393 aaPredicted RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 CCDC197Q8NCU1 140 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 THOC1Q96FV9 657 aaKnown RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 CCM2Q9BSQ5 444 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 FOXQ1Q9C009 403 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 C20orf27Q9GZN8 174 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 BTBD1Q9H0C5 482 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 MBNL1Q9NR56 388 aaKnown RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 EIF3FO00303 357 aaPredicted RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 HSPA4LO95757 839 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 MAT2AP31153 395 aaKnown RBP22.17■■□□□ 1.14
IRF3-201ENST00000309877 INPP5AQ14642 412 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 FRA10AC1Q70Z53 315 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 ADAMTSL2Q86TH1 951 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 UBALD2Q8IYN6 164 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 ANKS4BQ8N8V4 417 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 ASZ1Q8WWH4 475 aa22.17■■□□□ 1.14
IRF3-201ENST00000309877 COX14Q96I36 57 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms