RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 KIFC1Q9BW19 673 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 EPB41L1Q9H4G0 881 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 WASH6PQ9NQA3 447 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 CPNE7Q9UBL6 633 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 VPS9D1Q9Y2B5 631 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 NEU2Q9Y3R4 380 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 FAM221BA6H8Z2 402 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 TMEM8BA6NDV4 472 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 OR51F1A6NGY5 319 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 PCNX2A6NKB5 2137 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 D6RAR5 112 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 IFRD1O00458 451 aaPredicted RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 URI1O94763 535 aaPredicted RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 RPL10P27635 214 aaKnown RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 CALCOCO2Q13137 446 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 THOC5Q13769 683 aaKnown RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 MORF4L2Q15014 288 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 UNQ6494/PRO21346Q6UXR6 183 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 ZNF534Q76KX8 674 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 C17orf82Q86X59 251 aaPredicted RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 PDIK1LQ8N165 341 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 NAT8LQ8N9F0 302 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 SPATA4Q8NEY3 305 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 ZNF669Q96BR6 464 aaPredicted RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 SGSM3Q96HU1 749 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 LINC00615Q96LM1 132 aaPredicted RBP19.47■□□□□ 0.71
VEGFB-201ENST00000309422 CCM2Q9BSQ5 444 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 SLC23A2Q9UGH3 650 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 WASF3Q9UPY6 502 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 ST14Q9Y5Y6 855 aa19.47■□□□□ 0.71
VEGFB-201ENST00000309422 IGLV3-16A0A075B6K0 115 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 EFCAB8A8MWE9 144 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 CD3EAPO15446 510 aaKnown RBP19.46■□□□□ 0.71
VEGFB-201ENST00000309422 TTI1O43156 1089 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 NDUFS3O75489 264 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 CPNE6O95741 557 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 MAPK9P45984 424 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 DRG2P55039 364 aaKnown RBP19.46■□□□□ 0.71
VEGFB-201ENST00000309422 CCL7P80098 99 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 NFE2L1Q14494 772 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 RNASEH2BQ5TBB1 312 aaKnown RBP19.46■□□□□ 0.71
VEGFB-201ENST00000309422 KIAA0930Q6ICG6 404 aaPredicted RBP19.46■□□□□ 0.71
VEGFB-201ENST00000309422 ZNF438Q7Z4V0 828 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 PIM3Q86V86 326 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 GSDMBQ8TAX9 411 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 NAT9Q9BTE0 207 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 HEBP2Q9Y5Z4 205 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 AK5Q9Y6K8 562 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 RPS6KL1Q9Y6S9 549 aa19.46■□□□□ 0.71
VEGFB-201ENST00000309422 C17orf113A0A1B0GUU1 675 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 FAM237BA0A1B0GVD1 139 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 FAM187AA6NFU0 413 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 AVILO75366 819 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 VAPBO95292 243 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 POLBP06746 335 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 NMBRP28336 390 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 CDKN1CP49918 316 aaPredicted RBP19.45■□□□□ 0.7
VEGFB-201ENST00000309422 EPHA4P54764 986 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 INHBCP55103 352 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 CLDN6P56747 220 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 PLOD1Q02809 727 aaPredicted RBP19.45■□□□□ 0.7
VEGFB-201ENST00000309422 EIF3IQ13347 325 aaKnown RBP19.45■□□□□ 0.7
VEGFB-201ENST00000309422 NR1D2Q14995 579 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 PLCL1Q15111 1095 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 TMED2Q15363 201 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 CDCP2Q5VXM1 449 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 ABRAXAS1Q6UWZ7 409 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 C11orf96Q7Z7L8 435 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 PIANPQ8IYJ0 282 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 CFAP206Q8IYR0 622 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 MFSD3Q96ES6 412 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 STAMBPL1Q96FJ0 436 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 ZNF778Q96MU6 729 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 TRIM31Q9BZY9 425 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 RAB17Q9H0T7 212 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 EPB41L5Q9HCM4 733 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 TREX1Q9NSU2 369 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 IMP3Q9NV31 184 aaKnown RBP19.45■□□□□ 0.7
VEGFB-201ENST00000309422 GNPTGQ9UJJ9 305 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 UTP11Q9Y3A2 253 aaKnown RBP19.45■□□□□ 0.7
VEGFB-201ENST00000309422 SPTBN2O15020 2390 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 ZNF106Q9H2Y7 1883 aaKnown RBP19.45■□□□□ 0.7
VEGFB-201ENST00000309422 NCOR2Q9Y618 2525 aa19.45■□□□□ 0.7
VEGFB-201ENST00000309422 UBA6A0AVT1 1052 aaPredicted RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 A6NCN8 305 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 TTC4O95801 387 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 XRCC1P18887 633 aaPredicted RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PTGIRP43119 386 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 OR1D5P58170 312 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 B4GALNT1Q00973 533 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 KCTD19Q17RG1 926 aaPredicted RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 WHAMMP3Q1A5X7 153 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 ISXQ2M1V0 245 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PHF19Q5T6S3 580 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PTRHD1Q6GMV3 140 aaKnown RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 KLHL35Q6PF15 583 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 CAND1Q86VP6 1230 aaKnown RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 LRRC6Q86X45 466 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 SFTPA2Q8IWL1 248 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 MNS1Q8NEH6 495 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms