RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ENTPD5O75356 428 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SUPT7LO94864 414 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PENKP01210 267 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 CTSEP14091 401 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GABRB3P28472 473 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PTPN4P29074 926 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ACTR1BP42025 376 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SLC1A2P43004 574 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CASP9P55211 416 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TAS2R39P59534 338 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ACTR1AP61163 376 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GALNT2Q10471 571 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 HYAL2Q12891 473 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RCN2Q14257 317 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 STAT4Q14765 748 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SF1Q15637 639 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 CST6Q15828 149 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PFKFB4Q16877 469 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SYTL3Q4VX76 610 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PRSS36Q5K4E3 855 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TIGD7Q6NT04 549 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 TMEM220Q6QAJ8 160 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 UGT2A3Q6UWM9 527 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ZNF852Q6ZMS4 543 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SERPINA9Q86WD7 417 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SYTL1Q8IYJ3 562 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RNF217Q8TC41 542 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TEKT4Q8WW24 435 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 NTAN1Q96AB6 310 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CLIP3Q96DZ5 547 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GORASP1Q9BQQ3 440 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RHBGQ9H310 441 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TRABDQ9H4I3 376 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PRSS16Q9NQE7 514 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ARL8BQ9NVJ2 186 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ETAA1Q9NY74 926 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TAS2R1Q9NYW7 299 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GDE1Q9NZC3 331 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 IL36AQ9UHA7 158 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PFDN2Q9UHV9 154 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 EMCNQ9ULC0 261 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 AAR2Q9Y312 384 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 LOC100653049A0A140TA62 436 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SUPT3HB4E1H0 165 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CFAP99D6REC4 459 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PPP6CO00743 305 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 COPEO14579 308 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 VILLO15195 856 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SUPT3HO75486 399 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 KRT34O76011 436 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 POP4O95707 220 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 BPNT1O95861 308 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CD160O95971 181 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 AHSGP02765 367 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ZDHHC11BP0C7U3 371 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NTSR1P30989 418 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CPA2P48052 419 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 RFX3P48380 749 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 DEFB133Q30KQ1 61 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PARP15Q460N3 678 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CFAP157Q5JU67 520 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PPP1R2P3Q6NXS1 205 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 DHRS4L2Q6PKH6 230 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 FRA10AC1Q70Z53 315 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PARGQ86W56 976 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 HEATR4Q86WZ0 1026 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PLD6Q8N2A8 252 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 FIBINQ8TAL6 211 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SETD7Q8WTS6 366 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 EZH1Q92800 747 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 ARRDC3Q96B67 414 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CDKN2AIPNLQ96HQ2 116 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PPM1MQ96MI6 270 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SMC6Q96SB8 1091 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CDK5RAP1Q96SZ6 601 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 CLPBQ9H078 707 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 FAM83DQ9H4H8 585 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ACSS3Q9H6R3 686 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SEMA4BQ9NPR2 832 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 NKIRAS1Q9NYS0 192 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SLC24A2Q9UI40 661 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 LZTS1Q9Y250 596 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ANGPTL3Q9Y5C1 460 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 AKAP13Q12802 2813 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 RFPL1O75677 317 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ATP5HO75947 161 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PABPC4LP0CB38 370 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 GLULP15104 373 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CD1EP15812 388 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PDHA2P29803 388 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NR2C2P49116 596 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CTSCP53634 463 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NAGLUP54802 743 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SLC7A9P82251 487 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 IL10RBQ08334 325 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 LSAMPQ13449 338 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PDCD2Q16342 344 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 GSTA3Q16772 222 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms