RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CCR7P32248 378 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 MSX2P35548 267 aaPredicted RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 PKNOX1P55347 436 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ERVPABLB-1P60509 514 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 PCBP2Q15366 365 aaKnown RBP eCLIP6.45□□□□□ -1.38
USP47-201ENST00000305481 C16orf89Q6UX73 402 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 HSD11B1LQ7Z5J1 315 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 DDIASQ8IXT1 998 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 PGAM4Q8N0Y7 254 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 CELF5Q8N6W0 485 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 ZNF366Q8N895 744 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 OR2T11Q8NH01 316 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 PYDC1Q8WXC3 89 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 TTC1Q99614 292 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 HEPHQ9BQS7 1158 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 LATS2Q9NRM7 1088 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 DUS2Q9NX74 493 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 ZDHHC3Q9NYG2 299 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 NUDT4Q9NZJ9 180 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 MCM8Q9UJA3 840 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 PTBP2Q9UKA9 531 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 PRPF19Q9UMS4 504 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 PCDHGA7Q9Y5G6 932 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ATG2AQ2TAZ0 1938 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 OR7A17O14581 309 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 FFAR2O15552 330 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 OR4F21O95013 312 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 MLYCDO95822 493 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 RPSAP08865 295 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 ENO3P13929 434 aaPredicted RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 TIMP2P16035 220 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 NSG1P42857 185 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ATP4BP51164 291 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 GPM6BQ13491 265 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 GAB4Q2WGN9 574 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 XKR7Q5GH72 579 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 FAM78AQ5JUQ0 283 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 C6orf163Q5TEZ5 329 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 SCIMPQ6UWF3 145 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ADAMTSL2Q86TH1 951 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 RNF148Q8N7C7 305 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ZNF557Q8N988 423 aaPredicted RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 PDPRQ8NCN5 879 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 SMG7Q92540 1137 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 SCAMP4Q969E2 229 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 PBXIP1Q96AQ6 731 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 ZFYVE19Q96K21 471 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 NOL11Q9H8H0 719 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 S100A14Q9HCY8 104 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 SPATS2LQ9NUQ6 558 aaKnown RBP6.45□□□□□ -1.38
USP47-201ENST00000305481 NMRK1Q9NWW6 199 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 CACNA2D2Q9NY47 1150 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 STOML1Q9UBI4 398 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 TMCO1Q9UM00 188 aa6.45□□□□□ -1.38
USP47-201ENST00000305481 TSPAN11A1L157 253 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 CFLARO15519 480 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GUCA1CO95843 209 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SNRPB2P08579 225 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 UROSP10746 265 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ADH5P11766 374 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 HGFP14210 728 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 DGKAP23743 735 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 DIO3P55073 304 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 NME5P56597 212 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MS4A2Q01362 244 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 CCDC6Q16204 474 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 RBBP7Q16576 425 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 REP15Q6BDI9 236 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 BRAT1Q6PJG6 821 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 BNC2Q6ZN30 1099 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 LRRC74BQ6ZQY2 392 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GPRIN3Q6ZVF9 776 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 OSCP1Q8WVF1 389 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 NXPE3Q969Y0 559 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 TUBGCP3Q96CW5 907 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ZNF382Q96SR6 550 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 COPS8Q99627 209 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MCOLN1Q9GZU1 580 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 PCDH12Q9NPG4 1184 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SLC52A3Q9NQ40 469 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SUN2Q9UH99 717 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ZMYM5Q9UJ78 669 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 YBX2Q9Y2T7 364 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 OARD1Q9Y530 152 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 PRRT4C9JH25 899 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 C9JVG2 144 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 H3BNX3 289 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SLC9A3R1O14745 358 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 HOXC11O43248 304 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 TULP3O75386 442 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 PAPLNO95428 1278 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 XRCC1P18887 633 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 VIPR1P32241 457 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 PBX2P40425 430 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ETV3P41162 512 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GDF5P43026 501 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SLC6A11P48066 632 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 DGKGP49619 791 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ACADVLP49748 655 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms