RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 CRY2Q49AN0 593 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 LAPTM4BQ86VI4 370 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 PPTC7Q8NI37 304 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 GRIN3AQ8TCU5 1115 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 LPPQ93052 612 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 CNPPD1Q9BV87 410 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 SLC17A6Q9P2U8 582 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 PHF11Q9UIL8 331 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 FAM47E-STBD1D6RA91 191 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 NOS1APO75052 506 aaPredicted RBP12.71□□□□□ -0.37
COL3A1-201ENST00000304636 OR5F1O95221 314 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 MAPK9P45984 424 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 HSPA7P48741 367 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 MVKQ03426 396 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 TEAD4Q15561 434 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 ZNF420Q8TAQ5 688 aaPredicted RBP12.71□□□□□ -0.37
COL3A1-201ENST00000304636 C11orf24Q96F05 449 aaPredicted RBP12.71□□□□□ -0.37
COL3A1-201ENST00000304636 FEM1CQ96JP0 617 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 KCNS3Q9BQ31 491 aa12.71□□□□□ -0.37
COL3A1-201ENST00000304636 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
COL3A1-201ENST00000304636 STX16-NPEPL1H3BU86 382 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 hCG_2039718K7EN88 272 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 SEMA3DO95025 777 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 CCNB2O95067 398 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 PBX3P40426 434 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 OMPP47874 163 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 NDST2P52849 883 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 TUBA3CQ13748 450 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 HNRNPDQ14103 355 aaKnown RBP12.71□□□□□ -0.38
COL3A1-201ENST00000304636 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.71□□□□□ -0.38
COL3A1-201ENST00000304636 ADGRG6Q86SQ4 1221 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 SMG8Q8ND04 991 aaKnown RBP12.71□□□□□ -0.38
COL3A1-201ENST00000304636 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.38
COL3A1-201ENST00000304636 DHRS7Q9Y394 339 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 KIF1AQ12756 1690 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 GLYATL1P3A0A0U1RQE8 302 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 FGBP02675 491 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 ITPKAP23677 461 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 BIKQ13323 160 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 ZNHIT3Q15649 155 aaPredicted RBP12.71□□□□□ -0.38
COL3A1-201ENST00000304636 DCST1Q5T197 706 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 COMMD2Q86X83 199 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 DCBLD1Q8N8Z6 715 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 POMGNT2Q8NAT1 580 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 COL26A1Q96A83 441 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 FBXL18Q96ME1 805 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 DPEP3Q9H4B8 488 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 MARCH7Q9H992 704 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 SEC14L3Q9UDX4 400 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 EIF2B4Q9UI10 523 aaKnown RBP12.71□□□□□ -0.38
COL3A1-201ENST00000304636 ZDHHC2Q9UIJ5 367 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 RAI2Q9Y5P3 530 aa12.71□□□□□ -0.38
COL3A1-201ENST00000304636 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 H0Y858 1186 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SKP1P63208 163 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SLC25A11Q02978 314 aaKnown RBP12.7□□□□□ -0.38
COL3A1-201ENST00000304636 PUDPQ08623 228 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 DGKZQ13574 1117 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 NPTX1Q15818 432 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SPATS1Q496A3 300 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SDHAF4Q5VUM1 108 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 RASSF6Q6ZTQ3 369 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 TRPV3Q8NET8 790 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 OR52J3Q8NH60 311 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CCDC106Q9BWC9 280 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 ACTR3BQ9P1U1 418 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SIRPGQ9P1W8 387 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 MTRRQ9UBK8 725 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 FZD1Q9UP38 647 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 MAGEB17A8MXT2 336 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 TSPAN1O60635 241 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CDH5P33151 784 aaPredicted RBP12.7□□□□□ -0.38
COL3A1-201ENST00000304636 GRIA1P42261 906 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CYP4F8P98187 520 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 FAM174BQ3ZCQ3 159 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CLEC4DQ8WXI8 215 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 SEMA3GQ9NS98 782 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 INTS7Q9NVH2 962 aaKnown RBP12.7□□□□□ -0.38
COL3A1-201ENST00000304636 C1orf109Q9NX04 203 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 GMIPQ9P107 970 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CLPXO76031 633 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 PIGRP01833 764 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 RPL4P36578 427 aaKnown RBP12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CCR10P46092 362 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 RORCP51449 518 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 TIGD6Q17RP2 521 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CCDC157Q569K6 752 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 FBXO48Q5FWF7 155 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 CAPN13Q6MZZ7 669 aaPredicted RBP12.7□□□□□ -0.38
COL3A1-201ENST00000304636 PRR23BQ6ZRT6 265 aa12.7□□□□□ -0.38
COL3A1-201ENST00000304636 VANGL1Q8TAA9 524 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms