RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TNPO3Q9Y5L0 923 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-201ENST00000303383 MLYCDO95822 493 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 JUNP05412 331 aaKnown RBP14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 ITGB7P26010 798 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 PGM1P36871 562 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 MMP12P39900 470 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 PSMD8P48556 350 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 AGTR2P50052 363 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 DNAL1Q4LDG9 190 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 LIPIQ6XZB0 460 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 CACUL1Q86Y37 369 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 CSGALNACT1Q8TDX6 532 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 ELSPBP1Q96BH3 223 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 TRIM54Q9BYV2 358 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 PFDN4Q9NQP4 134 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 WWOXQ9NZC7 414 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 AGAP14A8MT82 685 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 OPRD1P41143 372 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 GRIA2P42262 883 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 WASP42768 502 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 MTHFRP42898 656 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 KLF10Q13118 480 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 ADAM15Q13444 863 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 SNCBQ16143 134 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 GAB4Q2WGN9 574 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 PHTF2Q8N3S3 785 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 FGF14Q92915 247 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 MARK4Q96L34 752 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 EIF2B4Q9UI10 523 aaKnown RBP14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 TRANK1O15050 2925 aa14.3□□□□□ -0.12
SHCBP1-201ENST00000303383 RGSL1A5PLK6 1076 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 FFAR2O15552 330 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 CDK14O94921 469 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 VCLP18206 1134 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 DCDC1P59894 354 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 SH3BP2P78314 561 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 CUL3Q13618 768 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 ATG2AQ2TAZ0 1938 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 SDHDO14521 159 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 UBFD1O14562 309 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 KPNA5O15131 536 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 INPP4BO15327 924 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 RNASEH1O60930 286 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 ENO3P13929 434 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 IL12RB1P42701 662 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 CRY1Q16526 586 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 C6orf163Q5TEZ5 329 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 FAM46CQ5VWP2 391 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 TMEM198Q66K66 360 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 ELMO1Q92556 727 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 ZNF576Q9H609 170 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 OR2AG2A6NM03 316 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 MEI4A8MW99 385 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 UBDO15205 165 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 FTH1P02794 183 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 HIST1H2AGP0C0S8 130 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 CBSLP0DN79 551 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 HIST1H2ADP20671 130 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 CBSP35520 551 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 STX1BP61266 288 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 SYTL3Q4VX76 610 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 LDLRAP1Q5SW96 308 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 RBM15BQ8NDT2 890 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 ARRDC3Q96B67 414 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 HIST1H2AHQ96KK5 128 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 HIST1H2AJQ99878 128 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 H2AFJQ9BTM1 129 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 CADM1Q9BY67 442 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 MRGBPQ9NV56 204 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 PPM1HQ9ULR3 514 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 COQ6Q9Y2Z9 468 aa14.29□□□□□ -0.12
SHCBP1-201ENST00000303383 ATP6AP2A0A1C7CYW4 349 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 QSOX1O00391 747 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 PLK4O00444 970 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 GSC2O15499 205 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 ATP6AP2O75787 350 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 THRAP10827 490 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 RALGDSQ12967 914 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 MTSS1LQ765P7 747 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 CXorf40AQ8TE69 158 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 CHFRQ96EP1 664 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 SCN8AQ9UQD0 1980 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 PPP6CO00743 305 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 SYNCRIPO60506 623 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 CCNT2O60583 730 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 CIB2O75838 187 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 COX4I1P13073 169 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 ADRB3P13945 408 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 EIF2DP41214 584 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 HK3P52790 923 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 E2F5Q15329 346 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 EGFLAMQ63HQ2 1017 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 EFL1Q7Z2Z2 1120 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 TWIST2Q8WVJ9 160 aa14.28□□□□□ -0.12
SHCBP1-201ENST00000303383 THTPAQ9BU02 230 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms