RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 NR4A1P22736 598 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 TAF6P49848 677 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 CDKN2DP55273 166 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 ZNF280AP59817 542 aaPredicted RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 PRKCDQ05655 676 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 VAC14Q08AM6 782 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 PWP1Q13610 501 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 ZNF404Q494X3 552 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 ANKS6Q68DC2 871 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 VASH1Q7L8A9 365 aaPredicted RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 PLD3Q8IV08 490 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 MCFD2Q8NI22 146 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 FATE1Q969F0 183 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 TP53INP1Q96A56 240 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 LGALS12Q96DT0 336 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 CCDC90BQ9GZT6 254 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 NXF2Q9GZY0 626 aaKnown RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 CCDC177Q9NQR7 707 aaPredicted RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 RGS18Q9NS28 235 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 FNIP2Q9P278 1114 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 GIMAP2Q9UG22 337 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 FZD1Q9UP38 647 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 PTGDR2Q9Y5Y4 395 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 HCRTO43612 131 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 MAFKO60675 156 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 KCNK2O95069 426 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 SCELO95171 688 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 KRT8P05787 483 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 RETP07949 1114 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 ZNF37AP17032 561 aaPredicted RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 MSH3P20585 1137 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 SERPINH1P50454 418 aaKnown RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 UFM1P61960 85 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 CCNA1P78396 465 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 PCBP1Q15365 356 aaKnown RBP eCLIP13.68□□□□□ -0.22
KARS-201ENST00000302445 NOL9Q5SY16 702 aaKnown RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 CAPN13Q6MZZ7 669 aaPredicted RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 TXNDC11Q6PKC3 985 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 KDELC1Q6UW63 502 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 SNX29P2Q8IUI4 249 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 ARHGAP12Q8IWW6 846 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 OR7G1Q8NGA0 311 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 GPR150Q8NGU9 434 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 PROX1Q92786 737 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 SLC47A1Q96FL8 570 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 TRIM8Q9BZR9 551 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 NOL6Q9H6R4 1146 aaKnown RBP13.68□□□□□ -0.22
KARS-201ENST00000302445 SMURF2Q9HAU4 748 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 OSER1Q9NX31 292 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.68□□□□□ -0.225e-9■■■□□ 18.3
KARS-201ENST00000302445 BTRCQ9Y297 605 aa13.68□□□□□ -0.22
KARS-201ENST00000302445 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
KARS-201ENST00000302445 MROH6A6NGR9 719 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 METTL15A6NJ78 407 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 C9JVG2 144 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 NDUFB5O43674 189 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 IDH3BO43837 385 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 INSRRP14616 1297 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 HUNKP57058 714 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 DEFA1P59665 94 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 DEFA3P59666 94 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 VBP1P61758 197 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 CHRNEQ04844 493 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 MAPK11Q15759 364 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 RAB41Q5JT25 222 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 CATSPEREQ5SY80 951 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 PAGE2Q7Z2X7 111 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 POC5Q8NA72 575 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 KIAA1191Q96A73 305 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 ZHX1-C8orf76Q96EF9 292 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 RPL10LQ96L21 214 aaKnown RBP13.67□□□□□ -0.22
KARS-201ENST00000302445 TEX37Q96LM6 180 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 C17orf80Q9BSJ5 609 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 ULBP1Q9BZM6 244 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 TKTL2Q9H0I9 626 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 SLC25A51Q9H1U9 297 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 V9GYQ6 96 aa13.67□□□□□ -0.22
KARS-201ENST00000302445 PTGES3LE9PB15 166 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 GNGT2O14610 69 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 RAD51BO15315 384 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 MAN1A2O60476 641 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 HLA-DQB2P05538 268 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 CD6P30203 668 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 TRPC1P48995 793 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 NDUFV1P49821 464 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 CSNK2BP67870 215 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 ACVR1Q04771 509 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 PIGFQ07326 219 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 NPTX1Q15818 432 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 TMEM236Q5W0B7 351 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 STEAP3Q658P3 488 aa13.66□□□□□ -0.22
KARS-201ENST00000302445 ZNF544Q6NX49 715 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms