RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 NDST3O95803 873 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 PORP16435 677 aaPredicted RBP13.9□□□□□ -0.18
SDC2-201ENST00000302190 PRDX3P30048 256 aaKnown RBP13.9□□□□□ -0.18
SDC2-201ENST00000302190 SYTL3Q4VX76 610 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 AARS2Q5JTZ9 985 aaKnown RBP13.9□□□□□ -0.18
SDC2-201ENST00000302190 C2CD4AQ8NCU7 369 aaPredicted RBP13.9□□□□□ -0.18
SDC2-201ENST00000302190 TNKS2Q9H2K2 1166 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 SMURF2Q9HAU4 748 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.9□□□□□ -0.18
SDC2-201ENST00000302190 CBFA2T3O75081 653 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 IL1BP01584 269 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 ELK4P28324 431 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 SCN1AP35498 2009 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 HK2P52789 917 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 CCL23P55773 120 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 C12orf43Q96C57 262 aaKnown RBP13.9□□□□□ -0.19
SDC2-201ENST00000302190 FEM1AQ9BSK4 669 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 USP22Q9UPT9 525 aa13.9□□□□□ -0.19
SDC2-201ENST00000302190 MAGED1Q9Y5V3 778 aaPredicted RBP13.9□□□□□ -0.19
SDC2-201ENST00000302190 TTC3P53804 2025 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 G3V2T6 193 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 I6L893 689 aaPredicted RBP13.89□□□□□ -0.19
SDC2-201ENST00000302190 PQBP1O60828 265 aaKnown RBP13.89□□□□□ -0.19
SDC2-201ENST00000302190 MYO1DO94832 1006 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 SLC25A14O95258 325 aaPredicted RBP13.89□□□□□ -0.19
SDC2-201ENST00000302190 TACR2P21452 398 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 GKP32189 559 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 SMAD3P84022 425 aaKnown RBP13.89□□□□□ -0.19
SDC2-201ENST00000302190 DMPKQ09013 629 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 BNIP2Q12982 314 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 KCNA10Q16322 511 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 ZNF678Q5SXM1 525 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 ZCCHC8Q6NZY4 707 aaKnown RBP13.89□□□□□ -0.19
SDC2-201ENST00000302190 ATG14Q6ZNE5 492 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 NUDT8Q8WV74 236 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 PTERQ96BW5 349 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 APOLD1Q96LR9 279 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 SLX1AQ9BQ83 275 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 IMPAD1Q9NX62 359 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 PCDHGA7Q9Y5G6 932 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 C7orf72A4D263 438 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 PLOD2O00469 737 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 TBL1XO60907 577 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 FAM20BO75063 409 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 MLYCDO95822 493 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 ANXA6P08133 673 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 DGKEP52429 567 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 NDST2P52849 883 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 TCEA2Q15560 299 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 UBXN11Q5T124 520 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 CYS1Q717R9 158 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 ADCK2Q7Z695 626 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 RNF180Q86T96 592 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 SLC15A3Q8IY34 581 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 KIAA2013Q8IYS2 634 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 LSMEM2Q8N112 164 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 SMOXQ9NWM0 555 aa13.89□□□□□ -0.19
SDC2-201ENST00000302190 TRNAU1APQ9NX07 287 aaKnown RBP13.89□□□□□ -0.19
SDC2-201ENST00000302190 MYCLP1P12525 358 aaPredicted RBP13.88□□□□□ -0.19
SDC2-201ENST00000302190 NAT1P18440 290 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 CAPN3P20807 821 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 TTPAP49638 278 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PRIM2P49643 509 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PGFP49763 221 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PTGR1Q14914 329 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 ZBTB6Q15916 424 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 C18orf21Q32NC0 220 aaPredicted RBP13.88□□□□□ -0.19
SDC2-201ENST00000302190 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 UNC50Q53HI1 259 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 BROXQ5VW32 411 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 AFTPHQ6ULP2 937 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PHACTR4Q8IZ21 702 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 GAB3Q8WWW8 586 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 SEPT8Q92599 483 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 DHRS1Q96LJ7 313 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 BBS2Q9BXC9 721 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 ABCB10Q9NRK6 738 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 TMA7Q9Y2S6 64 aaKnown RBP13.88□□□□□ -0.19
SDC2-201ENST00000302190 MYO10Q9HD67 2058 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 H3BNX3 289 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 hCG_2039718K7EN88 272 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 NME4O00746 187 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 OXTRP30559 389 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 KCNC1P48547 511 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 NEK2P51955 445 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 OR4D1Q15615 310 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 TRIM60Q495X7 471 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 MS4A13Q5J8X5 152 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 PAGE2BQ5JRK9 111 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 MARVELD2Q8N4S9 558 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 OR52B6Q8NGF0 335 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 FNDC8Q8TC99 324 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 SH3KBP1Q96B97 665 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 UGT2B28Q9BY64 529 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 SLAMF8Q9P0V8 285 aa13.88□□□□□ -0.19
SDC2-201ENST00000302190 SUCOQ9UBS9 1254 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms