RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TECRLQ5HYJ1 363 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 ZNF678Q5SXM1 525 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 RETSATQ6NUM9 610 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 MBOAT1Q6ZNC8 495 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 CTPS2Q9NRF8 586 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 GLUD1P00367 558 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 SERPINA1P01009 418 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 GBAP04062 536 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 ANXA5P08758 320 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 GJA1P17302 382 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 OR4D2P58180 307 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 TRAF3Q13114 568 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 MED22Q15528 200 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 SPANXN4Q5MJ08 99 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 TRPV3Q8NET8 790 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 PTERQ96BW5 349 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 CEP44Q9C0F1 390 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 NAA50Q9GZZ1 169 aaKnown RBP13.15□□□□□ -0.3
CASC4-201ENST00000299957 DNMT3LQ9UJW3 386 aa13.15□□□□□ -0.3
CASC4-201ENST00000299957 ELOVL7A1L3X0 281 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 KPNA3O00505 521 aaPredicted RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 KPNA4O00629 521 aaPredicted RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 GPC1P35052 558 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 DPP6P42658 865 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ATP6V0D1P61421 351 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 OR4D1Q15615 310 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 KCNA10Q16322 511 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 KLHL35Q6PF15 583 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 AGMOQ6ZNB7 445 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ERMP1Q7Z2K6 904 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 CMTR2Q8IYT2 770 aaKnown RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 FAM110BQ8TC76 370 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 BRSK1Q8TDC3 778 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 MCOLN3Q8TDD5 553 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ZFAND2BQ8WV99 257 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 GPATCH1Q9BRR8 931 aaKnown RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 ADAMTS10Q9H324 1103 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 OSGEPL1Q9H4B0 414 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 LRTM1Q9HBL6 345 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 TIMMDC1Q9NPL8 285 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 GTF2IRD1Q9UHL9 959 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 TPRKBQ9Y3C4 175 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 PCDHGA7Q9Y5G6 932 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 PSMD11O00231 422 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 SAP18O00422 153 aaKnown RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 SOCS7O14512 581 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 SCAMP1O15126 338 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 EPN2O95208 641 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 PGLSO95336 258 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 GNPDA1P46926 289 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 AIF1P55008 147 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 KIAA0319Q5VV43 1072 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ANKRD26P1Q6NSI1 321 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ZNF549Q6P9A3 640 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 SLC22A15Q8IZD6 547 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 PIK3C3Q8NEB9 887 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 NODALQ96S42 347 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 TESMINQ9Y4I5 508 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 DFNA5O60443 496 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 UGT2B4P06133 528 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 HTR6P50406 440 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 CSTF3Q12996 717 aaKnown RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 GTF2H2Q13888 395 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 MARCH8Q5T0T0 291 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 NANOGP8Q6NSW7 305 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 GTF2H2CQ6P1K8 395 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ADAMTSL2Q86TH1 951 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 MARVELD2Q8N4S9 558 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 C2CD4AQ8NCU7 369 aaPredicted RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 AUTS2Q8WXX7 1259 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 ISOC1Q96CN7 298 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 NUAK2Q9H093 628 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 NANOGQ9H9S0 305 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 SUCOQ9UBS9 1254 aaKnown RBP13.14□□□□□ -0.31
CASC4-201ENST00000299957 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
CASC4-201ENST00000299957 SMIM30A4D0T7 59 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 MYADML2A6NDP7 307 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 BCKDKO14874 412 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 CNOT3O75175 753 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 IGFBP5P24593 272 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 SLC5A2P31639 672 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 KCNC1P48547 511 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 TAZQ16635 292 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 DGUOKQ16854 277 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 XKR6Q5GH73 641 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 PAQR9Q6ZVX9 377 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 SERPINA9Q86WD7 417 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms