RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PSME3P61289 254 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 USP46P62068 366 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RPS24P62847 133 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TRAF3Q13114 568 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 HNRNPDQ14103 355 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 NEDD8Q15843 81 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PLEKHG4Q58EX7 1191 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TSTD2Q5T7W7 516 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 BRAT1Q6PJG6 821 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 MON1BQ7L1V2 547 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CXXC5Q7LFL8 322 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TMEM145Q8NBT3 493 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PNPT1Q8TCS8 783 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 MAPK15Q8TD08 544 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 POP5Q969H6 163 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 MYDGFQ969H8 173 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ARHGAP39Q9C0H5 1083 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC24A3Q9HC58 644 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CHRAC1Q9NRG0 131 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SERTAD3Q9UJW9 196 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 IKZF2Q9UKS7 526 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ABCC6O95255 1503 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 IGKV6D-41A0A0C4DH26 115 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TSC22D2O75157 780 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 MED26O95402 600 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZNF37AP17032 561 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PLA2G16P53816 162 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RGS8P57771 180 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 GBE1Q04446 702 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 BNIP2Q12982 314 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CCNIQ14094 377 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 HEPACAMQ14CZ8 416 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TIMM50Q3ZCQ8 353 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PDSS1Q5T2R2 415 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RANBP3LQ86VV4 465 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PLD5Q8N7P1 536 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZNF366Q8N895 744 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TSPAN14Q8NG11 270 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PTCD3Q96EY7 689 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 NECTIN4Q96NY8 510 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZSCAN5AQ9BUG6 496 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC32A1Q9H598 525 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 BATF3Q9NR55 127 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RASSF1Q9NS23 344 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CKLFQ9UBR5 152 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CORO1CQ9ULV4 474 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PLIN4Q96Q06 1357 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 H0YGN5 161 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 FSCN2O14926 492 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SYPP08247 313 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZCCHC18P0CG32 403 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RYKP34925 604 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 STAT5AP42229 794 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 KIR3DL1P43629 444 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SPIRE1Q08AE8 756 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZBTB6Q15916 424 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SOWAHAQ2M3V2 549 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 FOXR2Q6PJQ5 311 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RASSF6Q6ZTQ3 369 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CMC1Q7Z7K0 106 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TRMOQ9BU70 441 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CRISPLD1Q9H336 500 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC35C2Q9NQQ7 365 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CNTN3Q9P232 1028 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TCRBV9S1A1TA0A576 114 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 RGSL1A5PLK6 1076 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 HDAC3O15379 428 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 MMP20O60882 483 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 TRAPPC6AO75865 159 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 IPO13O94829 963 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CLPTM1O96005 669 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ESR1P03372 595 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ALPIP09923 528 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC7A1P30825 629 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 HNRNPH1P31943 449 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ASPAP45381 313 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SEPHS1P49903 392 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ELOCQ15369 112 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 PDK4Q16654 411 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZC3H14Q6PJT7 736 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SPESP1Q6UW49 350 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CLEC20AQ6ZU45 233 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 Q6ZVU0 165 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ADGRG6Q86SQ4 1221 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SAPCD2Q86UD0 394 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ZNF567Q8N184 647 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 OR2AJ1Q8NGZ0 328 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 FNIP1Q8TF40 1166 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 FAXDC2Q96IV6 333 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 COQ7Q99807 217 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CNOT6Q9ULM6 557 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ERGIC3Q9Y282 383 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 IFT172Q9UG01 1749 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 SLIT2O94813 1529 aa6.84□□□□□ -1.32
GAPVD1-202ENST00000297933 ILVBLA1L0T0 632 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms