RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 OR2AG2A6NM03 316 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 BHMG1C9JSJ3 638 aaPredicted RBP11.9□□□□□ -0.5
HMGB2-201ENST00000296503 AP3B1O00203 1094 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 NUDT21O43809 227 aaKnown RBP11.9□□□□□ -0.5
HMGB2-201ENST00000296503 DNAJC8O75937 253 aaPredicted RBP11.9□□□□□ -0.5
HMGB2-201ENST00000296503 RALBP11234 206 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 VCLP18206 1134 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 CCL7P80098 99 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 SARNPP82979 210 aaKnown RBP11.9□□□□□ -0.5
HMGB2-201ENST00000296503 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 C8orf74Q6P047 294 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 DET1Q7L5Y6 550 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 RASGEF1AQ8N9B8 481 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 WDR48Q8TAF3 677 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 SGF29Q96ES7 293 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 DEPDC7Q96QD5 511 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 TMBIM4Q9HC24 238 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 EIF2B3Q9NR50 452 aaKnown RBP11.9□□□□□ -0.5
HMGB2-201ENST00000296503 SMOXQ9NWM0 555 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 BFARQ9NZS9 450 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 RABGEF1Q9UJ41 708 aa11.9□□□□□ -0.5
HMGB2-201ENST00000296503 TRABD2BA6NFA1 517 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 ZW10O43264 779 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 POP7O75817 140 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 EML2O95834 649 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 C1QTNF9P0C862 333 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PNLIPP16233 465 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 IDSP22304 550 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 ALDH4A1P30038 563 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 NPY2RP49146 381 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PPM1FP49593 454 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 IRX1P78414 480 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CDK16Q00536 496 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 RIPK1Q13546 671 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 SPIDRQ14159 915 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 AGBL2Q5U5Z8 902 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 UNQ6494/PRO21346Q6UXR6 183 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CCDC121Q6ZUS5 278 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 NLRP9Q7RTR0 991 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 AMZ2Q86W34 360 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 C17orf82Q86X59 251 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 ZNF547Q8IVP9 402 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PARP9Q8IXQ6 854 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 GSPT2Q8IYD1 628 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PPHLN1Q8NEY8 458 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 ZNF514Q96K75 400 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 GFM1Q96RP9 751 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 RANBP9Q96S59 729 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 COPS8Q99627 209 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 TIMM29Q9BSF4 260 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PLXNB3Q9ULL4 1909 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 GMNCA6NCL1 334 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 OR5K4A6NMS3 321 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PDZK1P1A8MUH7 402 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CFAP99D6REC4 459 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 H7C0S8 307 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CASC3O15234 703 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 PPM1DO15297 605 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 MGRN1O60291 552 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 RPLP0P05388 317 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 F3P13726 295 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 SLC2A4P14672 509 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 TPSB2P20231 275 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CDKN1CP49918 316 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CLCNKAP51800 687 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CTSCP53634 463 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CACNG1Q06432 222 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 TSTD2Q5T7W7 516 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CDCP2Q5VXM1 449 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 RBM44Q6ZP01 1051 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 SERPINA9Q86WD7 417 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CCNJLQ8IV13 435 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 DCBLD1Q8N8Z6 715 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 OR6P1Q8NGX9 317 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 HEXDCQ8WVB3 486 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 GATA6Q92908 595 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 HDAC10Q969S8 669 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 DDX47Q9H0S4 455 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 LRRN3Q9H3W5 708 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 STN1Q9H668 368 aaKnown RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CHRAC1Q9NRG0 131 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 ZDHHC3Q9NYG2 299 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
HMGB2-201ENST00000296503 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-201ENST00000296503 CEP295Q9C0D2 2601 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-201ENST00000296503 AGAP14A8MT82 685 aa11.88□□□□□ -0.51
HMGB2-201ENST00000296503 KCNJ13O60928 360 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms