RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 FATE1Q969F0 183 aa13.03□□□□□ -0.32
RUBCN-202ENST00000296343 LRGUKQ96M69 825 aa13.03□□□□□ -0.32
RUBCN-202ENST00000296343 PKP2Q99959 881 aa13.03□□□□□ -0.32
RUBCN-202ENST00000296343 WRAP53Q9BUR4 548 aaKnown RBP13.03□□□□□ -0.32
RUBCN-202ENST00000296343 WWOXQ9NZC7 414 aa13.03□□□□□ -0.32
RUBCN-202ENST00000296343 PRKAG2Q9UGJ0 569 aa13.03□□□□□ -0.32
RUBCN-202ENST00000296343 PCTPQ9UKL6 214 aa13.03□□□□□ -0.32
RUBCN-202ENST00000296343 GRM6O15303 877 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 FFAR2O15552 330 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 ZNF7P17097 686 aaPredicted RBP13.02□□□□□ -0.32
RUBCN-202ENST00000296343 ETV3P41162 512 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 TNK2Q07912 1038 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 PTGR1Q14914 329 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 MPPE1Q53F39 396 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 SPPL2CQ8IUH8 684 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 PGAM4Q8N0Y7 254 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 CCDC28BQ9BUN5 200 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 ZNF385DQ9H6B1 395 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 PIDD1Q9HB75 910 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 TDP1Q9NUW8 608 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 B4GALT6Q9UBX8 382 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 KLQ9UEF7 1012 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 COQ6Q9Y2Z9 468 aa13.02□□□□□ -0.32
RUBCN-202ENST00000296343 OAS3Q9Y6K5 1087 aaKnown RBP13.02□□□□□ -0.32
RUBCN-202ENST00000296343 PFDN6O15212 129 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 FZD6O60353 706 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 ITPKAP23677 461 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 PTGER3P43115 390 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 LAMB3Q13751 1172 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 SQLEQ14534 574 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 SF1Q15637 639 aaKnown RBP13.02□□□□□ -0.33
RUBCN-202ENST00000296343 ARSIQ5FYB1 569 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 EP400NLQ6ZTU2 488 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 LCA5Q86VQ0 697 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 VRK3Q8IV63 474 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 LRTOMTQ8WZ04 291 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.02□□□□□ -0.33
RUBCN-202ENST00000296343 L3HYPDHQ96EM0 354 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 CNBD2Q96M20 576 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 BRD9Q9H8M2 597 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 ELOVL2Q9NXB9 296 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 APPL1Q9UKG1 709 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.33
RUBCN-202ENST00000296343 E2F3O00716 465 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
RUBCN-202ENST00000296343 TIPRLO75663 272 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 B3GALT4O96024 378 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 PTSQ03393 145 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 DDX39BQ13838 428 aaKnown RBP13.02□□□□□ -0.33
RUBCN-202ENST00000296343 ABRAXAS2Q15018 415 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 C6orf10Q5SRN2 563 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 GPRIN3Q6ZVF9 776 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 KBTBD6Q86V97 674 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 NKAPQ8N5F7 415 aaKnown RBP13.02□□□□□ -0.33
RUBCN-202ENST00000296343 ITFG1Q8TB96 612 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 PPM1MQ96MI6 270 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 LRRC3BQ96PB8 259 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.33
RUBCN-202ENST00000296343 CROCCQ5TZA2 2017 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 SYCE1LA8MT33 242 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 KPNA3O00505 521 aaPredicted RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 LEFTY1O75610 366 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 RNASEH2AO75792 299 aaKnown RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 CKMT2P17540 419 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 EFNA1P20827 205 aaPredicted RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 FOXD4Q12950 439 aaPredicted RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 STX5Q13190 355 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 MYLK3Q32MK0 819 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 PAGE3Q5JUK9 113 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 C6orf52Q5T4I8 152 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 C22orf39Q6P5X5 142 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 NECAB2Q7Z6G3 386 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 MIER2Q8N344 545 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 KCNJ9Q92806 393 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 LRRC3Q9BY71 257 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 SUV39H2Q9H5I1 410 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 TMEM202A6NGA9 273 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 LILRB3O75022 631 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 ESR1P03372 595 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 LBPP18428 481 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 PPM1AP35813 382 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 RECQLP46063 649 aaPredicted RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 GRIN2CQ14957 1233 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 MTX3Q5HYI7 312 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 SLC2A7Q6PXP3 512 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 SBSNQ6UWP8 590 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 GOLGA7Q7Z5G4 137 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 CPSF7Q8N684 471 aaKnown RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 CIB1Q99828 191 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 IGFLR1Q9H665 355 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 MAGEE1Q9HCI5 957 aa13.01□□□□□ -0.33
RUBCN-202ENST00000296343 INTS7Q9NVH2 962 aaKnown RBP13.01□□□□□ -0.33
RUBCN-202ENST00000296343 ARL15Q9NXU5 204 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms