RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 POP7O75817 140 aaKnown RBP19.23■□□□□ 0.67
CXCL3-201ENST00000296026 FGF5P12034 268 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 PTMSP20962 102 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 CTSCP53634 463 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 DMPKQ09013 629 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 SLC1A5Q15758 541 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 PPP2R5EQ16537 467 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 TFDP3Q5H9I0 405 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 LDLRAP1Q5SW96 308 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 GLT6D1Q7Z4J2 308 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 CNGA4Q8IV77 575 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 IPMKQ8NFU5 416 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 HAUS1Q96CS2 278 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 VAT1Q99536 393 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 RAB33BQ9H082 229 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 GOLPH3Q9H4A6 298 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 LNPEPQ9UIQ6 1025 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 ANAPC2Q9UJX6 822 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 PSMD13Q9UNM6 376 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 PCDHB3Q9Y5E6 796 aa19.23■□□□□ 0.67
CXCL3-201ENST00000296026 CYSRT1A8MQ03 144 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 SPAG6O75602 509 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 NELFEP18615 380 aaKnown RBP19.22■□□□□ 0.67
CXCL3-201ENST00000296026 HLA-DPA1P20036 260 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 FECHP22830 423 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 CA5AP35218 305 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 PPP1CAP62136 330 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 SEPT6Q14141 434 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 TMEM220Q6QAJ8 160 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 DDHD1Q8NEL9 900 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 GPR150Q8NGU9 434 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 PKP3Q9Y446 797 aa19.22■□□□□ 0.67
CXCL3-201ENST00000296026 hCG_1818297A0A087WSY0 165 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 GOLGA6L3A6NEY3 463 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 OR2AG2A6NM03 316 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 AKR1B15C9JRZ8 316 aaPredicted RBP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 KATNA1O75449 491 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 UBR5O95071 2799 aaPredicted RBP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 ZRANB2O95218 330 aaKnown RBP eCLIP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 CASRP41180 1078 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 HADHBP55084 474 aaKnown RBP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 MPP3Q13368 585 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 ITGA9Q13797 1035 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 ERV3-1Q14264 604 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 NFE2L1Q14494 772 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 RPE65Q16518 533 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 GPRC6AQ5T6X5 926 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 FAM83HQ6ZRV2 1179 aaPredicted RBP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 PPP1R3BQ86XI6 285 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 CCDC50Q8IVM0 306 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 KATNAL2Q8IYT4 538 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 RCOR2Q8IZ40 523 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 QKIQ96PU8 341 aaKnown RBP eCLIP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 RSPH14Q9UHP6 348 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 KCTD3Q9Y597 815 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 KCNMB2Q9Y691 235 aa19.21■□□□□ 0.67
CXCL3-201ENST00000296026 DNMT3AQ9Y6K1 912 aaPredicted RBP19.21■□□□□ 0.67
CXCL3-201ENST00000296026 IGHV5-51A0A0C4DH38 117 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 GAPDHSO14556 408 aaPredicted RBP19.2■□□□□ 0.66
CXCL3-201ENST00000296026 CCNYL3P0C7X3 344 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 PBLDP30039 288 aaPredicted RBP19.2■□□□□ 0.66
CXCL3-201ENST00000296026 MAGEA1P43355 309 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 MARCKSL1P49006 195 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 PTPRCAPQ14761 206 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 LACTB2Q53H82 288 aaPredicted RBP19.2■□□□□ 0.66
CXCL3-201ENST00000296026 CYB5D1Q6P9G0 228 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 KLHL35Q6PF15 583 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 SIDT2Q8NBJ9 832 aaKnown RBP19.2■□□□□ 0.66
CXCL3-201ENST00000296026 UBXN4Q92575 508 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 SLC41A2Q96JW4 573 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 FSD1LQ9BXM9 530 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 PDE7BQ9NP56 450 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 SEMA5BQ9P283 1151 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 KCND3Q9UK17 655 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 TRHDEQ9UKU6 1024 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 PADI1Q9ULC6 663 aa19.2■□□□□ 0.66
CXCL3-201ENST00000296026 HACD1B0YJ81 288 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 STX7O15400 261 aaKnown RBP19.19■□□□□ 0.66
CXCL3-201ENST00000296026 TIAF1O95411 115 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 MT-ND3P03897 115 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 FURINP09958 794 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 AKT1P31749 480 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 TUBB3Q13509 450 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 PLCL1Q15111 1095 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 FNBP1LQ5T0N5 605 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 BEND7Q8N7W2 519 aaPredicted RBP19.19■□□□□ 0.66
CXCL3-201ENST00000296026 RNF214Q8ND24 703 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 ZNF398Q8TD17 642 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 TSPY26PQ9H489 355 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 IMP3Q9NV31 184 aaKnown RBP19.19■□□□□ 0.66
CXCL3-201ENST00000296026 SMOXQ9NWM0 555 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 RARRES3Q9UL19 164 aa19.19■□□□□ 0.66
CXCL3-201ENST00000296026 AGTP01019 485 aa19.18■□□□□ 0.66
CXCL3-201ENST00000296026 FOLR1P15328 257 aa19.18■□□□□ 0.66
CXCL3-201ENST00000296026 MSH3P20585 1137 aa19.18■□□□□ 0.66
CXCL3-201ENST00000296026 TBX2Q13207 712 aaPredicted RBP19.18■□□□□ 0.66
CXCL3-201ENST00000296026 XRCC4Q13426 336 aa19.18■□□□□ 0.66
CXCL3-201ENST00000296026 DNASE1L3Q13609 305 aa19.18■□□□□ 0.66
CXCL3-201ENST00000296026 KCNAB1Q14722 419 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms