RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OPRL1P41146 370 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 VBP1P61758 197 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 CYP4F2P78329 520 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 CYP4F3Q08477 520 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ARHGEF7Q14155 803 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 DMC1Q14565 340 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM236Q5W0B7 351 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 DET1Q7L5Y6 550 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ATP6V0D2Q8N8Y2 350 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 HS3ST4Q9Y661 456 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 THSD7AQ9UPZ6 1657 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 A0A0U1RQS6 177 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 DIRAS1O95057 198 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ANGPTL1O95841 491 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 PIM1P11309 404 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 LEPRP48357 1165 aaKnown RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ZBTB6Q15916 424 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 MARCH8Q5T0T0 291 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 TAPT1Q6NXT6 567 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 PROSER1Q86XN7 944 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF420Q8TAQ5 688 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 MCOLN3Q8TDD5 553 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 NDEL1Q9GZM8 345 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 NDUFS2O75306 463 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PRKD3O94806 890 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 G6PDP11413 515 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CD1DP15813 335 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 AGXTP21549 392 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CYP2C18P33260 490 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 S100A5P33763 92 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 HLCSP50747 726 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 TRIM32Q13049 653 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 GRB14Q14449 540 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 MAPRE1Q15691 268 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 FAM174BQ3ZCQ3 159 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CACHD1Q5VU97 1274 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 DENND5AQ6IQ26 1287 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 RNF19BQ6ZMZ0 732 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 RASAL3Q86YV0 1011 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 TPD52L3Q96J77 140 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 TEX37Q96LM6 180 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ADAMTS10Q9H324 1103 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PARVBQ9HBI1 364 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 MTRRQ9UBK8 725 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PCDHB3Q9Y5E6 796 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 NRXN2Q9P2S2 1712 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PTPRFP10586 1907 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 NUP214P35658 2090 aaPredicted RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 TARM1B6A8C7 271 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CD97P48960 835 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ST13P50502 369 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 HMGCS1Q01581 520 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ALFQ53S48 1182 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 IGFN1Q86VF2 1251 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ADHFE1Q8IWW8 467 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 LGI2Q8N0V4 545 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 MINDY1Q8N5J2 469 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CNIH3Q8TBE1 160 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ACDQ96AP0 544 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 FUNDC2Q9BWH2 189 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PALMDQ9NP74 551 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 COL1A2P08123 1366 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 RBBP6Q7Z6E9 1792 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CEP290O15078 2479 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 RGS5O15539 181 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 MLYCDO95822 493 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 KRT8P05787 483 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 KCNAB2Q13303 367 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CPSF6Q16630 551 aaKnown RBP eCLIP13.24□□□□□ -0.292e-9■■■■■ 44.3
SCAF4-201ENST00000286835 LCN8Q6JVE9 175 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 SPATA19Q7Z5L4 167 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PHACTR4Q8IZ21 702 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 REXO4Q9GZR2 422 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF385DQ9H6B1 395 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 GABRQQ9UN88 632 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 PCDHGC4Q9Y5F7 938 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CORINQ9Y5Q5 1042 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 A8MU76 341 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 INMTO95050 263 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CPSF4O95639 269 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 UMPSP11172 480 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 SHMT2P34897 504 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 ACVRL1P37023 503 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 YBX1P67809 324 aaKnown RBP13.24□□□□□ -0.29
SCAF4-201ENST00000286835 FPGSQ05932 587 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 SYT16Q17RD7 645 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM207Q6UWW9 146 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 NANOGNBQ7Z5D8 188 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 HID1Q8IV36 788 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 SH3RF2Q8TEC5 729 aa13.24□□□□□ -0.29
SCAF4-201ENST00000286835 AURKBQ96GD4 344 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms