RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 MCUR1Q96AQ8 359 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 OPALINQ96PE5 141 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 MRPL57Q9BQC6 102 aaKnown RBP7.51□□□□□ -1.21
TRIM42-201ENST00000286349 BTBD2Q9BX70 525 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 C1QTNF1Q9BXJ1 281 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 C20orf27Q9GZN8 174 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 ILKAPQ9H0C8 392 aaPredicted RBP7.51□□□□□ -1.21
TRIM42-201ENST00000286349 GHITMQ9H3K2 345 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 CAB39LQ9H9S4 337 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 PDFQ9HBH1 243 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 MRPL40Q9NQ50 206 aaKnown RBP7.51□□□□□ -1.21
TRIM42-201ENST00000286349 MRPL17Q9NRX2 175 aaKnown RBP7.51□□□□□ -1.21
TRIM42-201ENST00000286349 VTI1BQ9UEU0 232 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 AP3M1Q9Y2T2 418 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 PLXNA4Q9HCM2 1894 aa7.51□□□□□ -1.21
TRIM42-201ENST00000286349 A0A1B0GVM2 712 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 A0A1B0GWJ7 208 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 TCAF2A6NFQ2 919 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CACNB4O00305 520 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PER2O15055 1255 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 KDELR3O43731 214 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ITM2AO43736 263 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ADAM11O75078 769 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CLN5O75503 358 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SEC24AO95486 1093 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 HEXBP07686 556 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 TFPTP0C1Z6 253 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SLC35E2BP0CK96 405 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 HOXA6P31267 233 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PPM1FP49593 454 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 EIF2B2P49770 351 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CLCN4P51793 760 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SEC13P55735 322 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 P2RX3P56373 397 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 RPS3AP61247 264 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CSNK2BP67870 215 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PRAMEP78395 509 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 DSC2Q02487 901 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ACVR1Q04771 509 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ZNF33BQ06732 778 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 C19orf57Q0VDD7 668 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PLD1Q13393 1074 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CES4AQ5XG92 561 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 LRRC8EQ6NSJ5 796 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 Q7L0L9 218 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ALYREFQ86V81 257 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PLD6Q8N2A8 252 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SLC25A41Q8N5S1 370 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ENDOVQ8N8Q3 282 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 TEX47Q8TBZ9 253 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 STYXQ8WUJ0 223 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CIDECQ96AQ7 238 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ELMO2Q96JJ3 720 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CMTM3Q96MX0 182 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 FAM161BQ96MY7 647 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 NUDCD1Q96RS6 583 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SORT1Q99523 831 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 USB1Q9BQ65 265 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 MGME1Q9BQP7 344 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 TRIM15Q9C019 465 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ARL8BQ9NVJ2 186 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SELENONQ9NZV5 590 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 UBA2Q9UBT2 640 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 MARCOQ9UEW3 520 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 RUVBL2Q9Y230 463 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 TDRKHQ9Y2W6 561 aaKnown RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 RAP2CQ9Y3L5 183 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 GREB1Q4ZG55 1949 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 DOCK4Q8N1I0 1966 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 NUP205Q92621 2012 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PRUNE2Q8WUY3 3088 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 FUOMA2VDF0 154 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CHURC1-FNTBB4DL54 471 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SLC9A3R1O14745 358 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 NPHS1O60500 1241 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 MAGEC1O60732 1142 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PEX11AO75192 247 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 NIPSNAP2O75323 286 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CRTAMO95727 393 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 URODP06132 367 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 RBP1P09455 135 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 EPB42P16452 691 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 GABRB3P28472 473 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PRDX6P30041 224 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 BCAP31P51572 246 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CCR3P51677 355 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 DNAJB13P59910 316 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 MAXP61244 160 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 MPP1Q00013 466 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 IRF9Q00978 393 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 PRKAA1Q13131 559 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 ZNF177Q13360 481 aaPredicted RBP7.5□□□□□ -1.21
TRIM42-201ENST00000286349 CTBP1Q13363 440 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 RAB33AQ14088 237 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 RCN2Q14257 317 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 NPTX1Q15818 432 aa7.5□□□□□ -1.21
TRIM42-201ENST00000286349 SIRPB2Q5JXA9 342 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms