RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SPTBN1Q01082 2364 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SLC30A4O14863 429 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PDPK1O15530 556 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 OR1I1O60431 355 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 USP12O75317 370 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 LYPLA1O75608 230 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 EOMESO95936 686 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PFKMP08237 780 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 LIPEQ05469 1076 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SCN1BQ07699 218 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 FAAP100Q0VG06 881 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DGKZQ13574 1117 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SNAPC1Q16533 368 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SGCBQ16585 318 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 C9orf57Q5W0N0 161 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SPATA19Q7Z5L4 167 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 CUZD1Q86UP6 607 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 IQCF2Q8IXL9 164 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 KIAA0895Q8NCT3 520 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TRPM4Q8TD43 1214 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 COQ8BQ96D53 544 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 ZSCAN5AQ9BUG6 496 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 LRRC19Q9H756 370 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 MKKSQ9NPJ1 570 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 FBXO6Q9NRD1 293 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 GTF2IRD1Q9UHL9 959 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 INSL6Q9Y581 213 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DIP2CQ9Y2E4 1556 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 POLR1AO95602 1720 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SMIM28A0A1B0GU29 152 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 M0R129 80 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 LIASO43766 372 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 COQ9O75208 318 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PDYNP01213 254 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 ATF6P18850 670 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PVALBP20472 110 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 GADD45AP24522 165 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TSPAN5P62079 268 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 GNA12Q03113 381 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PDK4Q16654 411 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 METTL21CQ5VZV1 264 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 FUT10Q6P4F1 479 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SLITRK4Q8IW52 837 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 POC5Q8NA72 575 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF548Q8NEK5 533 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 HM13Q8TCT9 377 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 HMGB4Q8WW32 186 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TATDN2Q93075 761 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 OTUB2Q96DC9 234 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF599Q96NL3 588 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DGCR6LQ9BY27 220 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DPEP2Q9H4A9 486 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TMEM184CQ9NVA4 438 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TAS2R7Q9NYW3 318 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 RAI2Q9Y5P3 530 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 CASKO14936 926 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SLC22A2O15244 555 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PEX11AO75192 247 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 FARS2O95363 451 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PSMG1O95456 288 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 RENP00797 406 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 MT-ND5P03915 603 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 RLN2P04090 185 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TACR2P21452 398 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SP100P23497 879 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 MAPK3P27361 379 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 CORO1AP31146 461 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 RPS9P46781 194 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DRG2P55039 364 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 RBBP4Q09028 425 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PRR23BQ6ZRT6 265 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DET1Q7L5Y6 550 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 YTHDF3Q7Z739 585 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 MREGQ8N565 214 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PNPT1Q8TCS8 783 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SNRNP27Q8WVK2 155 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 SLC9A6Q92581 669 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 NMD3Q96D46 503 aaKnown RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 C11orf24Q96F05 449 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TMEM121BQ9BXQ6 578 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-201ENST00000283254 TLR10Q9BXR5 811 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 DNAJC28Q9NX36 388 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF639Q9UID6 485 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PADI2Q9Y2J8 665 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 PEX16Q9Y5Y5 336 aa4.03□□□□□ -1.76
SCN3A-201ENST00000283254 EDDM13A0A1B0GTR0 161 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ELOA3DA6NLF2 546 aaPredicted RBP4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF726A6NNF4 738 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 GABRDO14764 452 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 SCGNO76038 276 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 CST1P01037 141 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 TACSTD2P09758 323 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 SLC6A9P48067 706 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ARCN1P48444 511 aaKnown RBP4.03□□□□□ -1.77
SCN3A-201ENST00000283254 APLP1P51693 650 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 CASP5P51878 434 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 MRPL49Q13405 166 aaKnown RBP4.03□□□□□ -1.77
SCN3A-201ENST00000283254 CAPSQ13938 189 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 UBXN2BQ14CS0 331 aa4.03□□□□□ -1.77
SCN3A-201ENST00000283254 ELOA3BQ3SY89 546 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms