RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 DTX3Q8N9I9 347 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 BEST2Q8NFU1 509 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 SPATA22Q8NHS9 363 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 EXT2Q93063 718 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ISG20Q96AZ6 181 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ZNF419Q96HQ0 510 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 REXO5Q96IC2 774 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 HPDLQ96IR7 371 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 NSMCE2Q96MF7 247 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 FYTTD1Q96QD9 318 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 PCYT2Q99447 389 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 BARD1Q99728 777 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 MRPL45Q9BRJ2 306 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 CDADC1Q9BWV3 514 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 BEX2Q9BXY8 128 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ZNF717Q9BY31 904 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 NARFLQ9H6Q4 476 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ALG9Q9H6U8 611 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ADARB2Q9NS39 739 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 SPEF1Q9Y4P9 236 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 SCN1AP35498 2009 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 SAGE2PA6NJ88 616 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 EVPLLA8MZ36 301 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 AREL1O15033 823 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 DCLK1O15075 740 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 PGLSO95336 258 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 MATN4O95460 622 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 CPB1P15086 417 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 IMPDH1P20839 514 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 HTR1EP28566 365 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 RCAN2Q14206 197 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 MFSD10Q14728 455 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 TMEM132BQ14DG7 1078 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 LAPTM4AQ15012 233 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 TBRG1Q3YBR2 411 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ZNF544Q6NX49 715 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 VN1R5Q7Z5H4 357 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 NRARPQ7Z6K4 114 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 GALNT5Q7Z7M9 940 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 RNF149Q8NC42 400 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 FBXO30Q8TB52 745 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 UBE2FQ969M7 185 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 TUBGCP3Q96CW5 907 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 NECTIN4Q96NY8 510 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ASB2Q96Q27 587 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 VPS35Q96QK1 796 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 NIFKQ9BYG3 293 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 CDT1Q9H211 546 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 CXCL16Q9H2A7 254 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 TNKS2Q9H2K2 1166 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 MUC13Q9H3R2 512 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 DUSP21Q9H596 190 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 RUBCNLQ9H714 662 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 KAT8Q9H7Z6 458 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 ACOT13Q9NPJ3 140 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 KIAA1257Q9ULG3 409 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 NEUROG3Q9Y4Z2 214 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 PCDHGB6Q9Y5F9 930 aa9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 MN1Q10571 1320 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-201ENST00000274901 A0A087X1B8 175 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 MTSS1O43312 755 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 SCO1O75880 301 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 FKBP9O95302 570 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 CCDC159P0C7I6 412 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 IQCF3P0C7M6 154 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 RAP2AP10114 183 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 DDOSTP39656 456 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 OR3A3P47888 321 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 NPY2RP49146 381 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 EEFSECP57772 596 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 PLIN5Q00G26 463 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 SLAMF1Q13291 335 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 TOP3AQ13472 1001 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 GPR50Q13585 617 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 MXD4Q14582 209 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 PAFAH1B3Q15102 231 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 TARBP2Q15633 366 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 SYPL2Q5VXT5 272 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 MPZL3Q6UWV2 235 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 CATSPERGQ6ZRH7 1159 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 PRR23CQ6ZRP0 262 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 PIM3Q86V86 326 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 ITFG1Q8TB96 612 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 ZNF566Q969W8 418 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 PTERQ96BW5 349 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 DPEP3Q9H4B8 488 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 MINDY3Q9H8M7 445 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 TRMT13Q9NUP7 481 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 ACOXLQ9NUZ1 547 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 VNN3Q9NY84 501 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 KCNN3Q9UGI6 736 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 U3KQV3 271 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 DICER1Q9UPY3 1922 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 OR2A25A4D2G3 310 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 C19orf81C9J6K1 198 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 CTDSP2O14595 271 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 BCKDKO14874 412 aa9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 EEDO75530 441 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-201ENST00000274901 MT-CYBP00156 380 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms