RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CORO1CQ9ULV4 474 aaPredicted RBP9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 RUVBL2Q9Y230 463 aaKnown RBP9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 ACOT9Q9Y305 439 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 USP34Q70CQ2 3546 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 A0A1W2PPC4 97 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 LILRB5O75023 590 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CEACAM5P06731 702 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PYGLP06737 847 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 MYCLP1P12525 358 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 NR1D1P20393 614 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CRABP2P29373 138 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 AVPR2P30518 371 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PPP2R2AP63151 447 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TAF1BQ53T94 588 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ACSBG2Q5FVE4 666 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 N4BP2L1Q5TBK1 243 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 Q6ZSR6 202 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CLEC14AQ86T13 490 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TRAPPC5Q8IUR0 188 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 VRK3Q8IV63 474 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CPNE9Q8IYJ1 553 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TMEM145Q8NBT3 493 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 DENND6BQ8NEG7 585 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TCP10LQ8TDR4 215 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ACMSDQ8TDX5 336 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 HEXDCQ8WVB3 486 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 KCNJ9Q92806 393 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TSPAN17Q96FV3 270 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 APOPT1Q96IL0 206 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 SPACA7Q96KW9 195 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 MIR1-1HGQ9H1L0 117 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 SENP1Q9P0U3 644 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC23A2Q9UGH3 650 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ZNHIT2Q9UHR6 403 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TRMT6Q9UJA5 497 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 EMCNQ9ULC0 261 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 DHRS7Q9Y394 339 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PLEKHM1Q9Y4G2 1056 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ACTL7BQ9Y614 415 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 COMMD10Q9Y6G5 202 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 SPAG17Q6Q759 2223 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 MEI4A8MW99 385 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PRAMEF26H0Y7S4 382 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 H3BMM5 538 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CACNB4O00305 520 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 HRO43593 1189 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 NUAK1O60285 661 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 POP7O75817 140 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 KLHL2O95198 593 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 WNT1P04628 370 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ZNF37AP17032 561 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 AOAHP28039 575 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TEAD1P28347 426 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 HOXA6P31267 233 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CRHR1P34998 444 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PREPP48147 710 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PRLHRP49683 370 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 PFN3P60673 137 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 HSPA14Q0VDF9 509 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 GTF2H3Q13889 308 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 BOP1Q14137 746 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TTC19Q6DKK2 380 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ENPP7Q6UWV6 458 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 XKR5Q6UX68 686 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 RD3Q7Z3Z2 195 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 C11orf96Q7Z7L8 435 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC22A18ASQ8N1D0 253 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ZBTB2Q8N680 514 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 CADM4Q8NFZ8 388 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ELMO1Q92556 727 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 INPP5DQ92835 1189 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 TSACCQ96A04 125 aaPredicted RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 UBXN10Q96LJ8 280 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 GPR78Q96P69 363 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 FAM111AQ96PZ2 611 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 FGF22Q9HCT0 170 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 C11orf16Q9NQ32 467 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 AASDHPPTQ9NRN7 309 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 SPATS2LQ9NUQ6 558 aaKnown RBP9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 GULP1Q9UBP9 304 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 HS3ST3A1Q9Y663 406 aa9.58□□□□□ -0.88
SNRNP40-201ENST00000263694 ATXN2Q99700 1313 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 A0A087X1B8 175 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 WDR91A4D1P6 747 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CDC7O00311 574 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CHUKO15111 745 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PRPF4O43172 522 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 GRID2O43424 1007 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 ZBTB14O43829 449 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 VEGFDO43915 354 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 AP2A2O94973 939 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 TSPAN12O95859 305 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 SBK3P0C264 359 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 THEGLP0DJG4 465 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CHN1P15882 459 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CD27P26842 260 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PDHA2P29803 388 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 KCNC1P48547 511 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms