RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MAGEA13PA6NCF6 341 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MANSC4A6NHS7 340 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TARM1B6A8C7 271 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 INPPL1O15357 1258 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 AMHP03971 560 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 THRAP10827 490 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 NMBRP28336 390 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 CCR1P32246 355 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SCNN1GP51170 649 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 KCNQ1P51787 676 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MLLT6P55198 1093 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 KLF10Q13118 480 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 OLIG2Q13516 323 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 GRM3Q14832 879 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PRR31Q5SQ13 230 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MAP3K21Q5TCX8 1036 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 AFMIDQ63HM1 303 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 KIAA0930Q6ICG6 404 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 C17orf99Q6UX52 265 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 GALNT7Q86SF2 657 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 THEM5Q8N1Q8 247 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 KLHL36Q8N4N3 616 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ZNF781Q8N8C0 355 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TDRD5Q8NAT2 981 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PPHLN1Q8NEY8 458 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 DTX3LQ8TDB6 740 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 FAM167BQ9BTA0 163 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 RHOBTB2Q9BYZ6 727 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 S100A14Q9HCY8 104 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 CD320Q9NPF0 282 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TCF7L2Q9NQB0 619 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TBC1D13Q9NVG8 400 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MIOSQ9NXC5 875 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ZDHHC7Q9NXF8 308 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 CDH22Q9UJ99 828 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 VPS28Q9UK41 221 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SUFUQ9UMX1 484 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SSX2IPQ9Y2D8 614 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TCAF1Q9Y4C2 921 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ZNF638Q14966 1978 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 A0A087X1B8 175 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 A0A0U1RQF3 1178 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA12O60330 932 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 NDUFS2O75306 463 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 CHRNA1P02708 482 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SLC35E2BP0CK96 405 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 COX4I1P13073 169 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ITGAXP20702 1163 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 BDNFP23560 247 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ADRA1AP35348 466 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ARCN1P48444 511 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 RPL14P50914 215 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 AFF3P51826 1226 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MTTPP55157 894 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 DNAJB13P59910 316 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 RAB10P61026 200 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SLC25A3Q00325 362 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TSPY1Q01534 308 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MALLQ13021 153 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TOP3AQ13472 1001 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 HNRNPDQ14103 355 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TRIM25Q14258 630 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 USP10Q14694 798 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SSPNQ14714 243 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 CCL14Q16627 93 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 GFOD2Q3B7J2 385 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 MINDY4Q4G0A6 757 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ZMAT1Q5H9K5 638 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SEL1L3Q68CR1 1132 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 C16orf89Q6UX73 402 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 NAPRTQ6XQN6 538 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 RAPH1Q70E73 1250 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PIWIL4Q7Z3Z4 852 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 RP9Q8TA86 221 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ZCCHC14Q8WYQ9 949 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 AZIN2Q96A70 460 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SPDL1Q96EA4 605 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 CLPTM1LQ96KA5 538 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 C1orf74Q96LT6 269 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 RANBP9Q96S59 729 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SERPINI1Q99574 410 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 TASP1Q9H6P5 420 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ARNT2Q9HBZ2 717 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SPATS2LQ9NUQ6 558 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SPATA6Q9NWH7 488 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 IL1RAPL1Q9NZN1 696 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 BCAP29Q9UHQ4 241 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SCOCQ9UIL1 159 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SLC39A10Q9ULF5 831 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 ACOT9Q9Y305 439 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA9Q9Y5G4 932 aaKnown RBP7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA8Q9Y5G5 932 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA7Q9Y5G6 932 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA6Q9Y5G7 932 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA3Q9Y5H0 932 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PCDHGA2Q9Y5H1 932 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 SQORQ9Y6N5 450 aa7.86□□□□□ -1.15
CXCR4-201ENST00000241393 PATJQ8NI35 1801 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms