RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 AASDHQ4L235 1098 aaPredicted RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 C6orf141Q5SZD1 244 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 SULT1C3Q6IMI6 304 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 MRNIPQ6NTE8 343 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 LETMD1Q6P1Q0 360 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 MSANTD2Q6P1R3 559 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 TLK2Q86UE8 772 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ZFAND4Q86XD8 727 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 DOCK3Q8IZD9 2030 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 TEX26Q8N6G2 289 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 OR10Q1Q8NGQ4 319 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 GABPB2Q8TAK5 448 aaPredicted RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 FRS2Q8WU20 508 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 TSPEARQ8WU66 669 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 FIG4Q92562 907 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ZNF583Q96ND8 569 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ALPK1Q96QP1 1244 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 MUC13Q9H3R2 512 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 SACM1LQ9NTJ5 587 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 VAPAQ9P0L0 249 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 FNDC3AQ9Y2H6 1198 aaKnown RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 CPQQ9Y646 472 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 FAM234BA2RU67 622 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 TMEM247A6NEH6 219 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 G3V2T6 193 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 GPR39O43194 453 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 RPP40O75818 363 aaKnown RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 TSPAN12O95859 305 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 KCNAB2Q13303 367 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SPATS1Q496A3 300 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 PROSER1Q86XN7 944 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SCN4BQ8IWT1 228 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 C8orf59Q8N0T1 100 aaPredicted RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 SIDT2Q8NBJ9 832 aaKnown RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 KLHDC9Q8NEP7 349 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 GPR150Q8NGU9 434 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 ZFP90Q8TF47 636 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 CDKN2AIPNLQ96HQ2 116 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 DERL2Q9GZP9 239 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 ADARB2Q9NS39 739 aaKnown RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 WASH4PA8MWX3 477 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 E2F3O00716 465 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 XPNPEP2O43895 674 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 NIPSNAP2O75323 286 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 VPS4BO75351 444 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 DEAF1O75398 565 aaPredicted RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 RAP2AP10114 183 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 UROSP10746 265 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 ODC1P11926 461 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 HPCAL1P37235 193 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 FPGSQ05932 587 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SPIDRQ14159 915 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 OXA1LQ15070 435 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 DDR2Q16832 855 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 RFTN2Q52LD8 501 aaPredicted RBP12.25□□□□□ -0.45
NUP88-201ENST00000225696 FBXL22Q6P050 247 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 PIANPQ8IYJ0 282 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SCML4Q8N228 414 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 EEF1AKMT1Q8WVE0 214 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SDCCAG3Q96C92 435 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 CGREF1Q99674 301 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 HEPHQ9BQS7 1158 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 PALMDQ9NP74 551 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 FLRT1Q9NZU1 646 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 DAPK2Q9UIK4 370 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 PDE10AQ9Y233 779 aa12.25□□□□□ -0.45
NUP88-201ENST00000225696 LCHNA4D1U4 455 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 IQCF5A8MTL0 148 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 HAS3O00219 553 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 ANKRD28O15084 1053 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 TSPAN3O60637 253 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 JRKO75564 520 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 HMBSP08397 361 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 GGT1P19440 569 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 PCMT1P22061 227 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 EIF2B2P49770 351 aaKnown RBP12.24□□□□□ -0.45
NUP88-201ENST00000225696 RAB15P59190 212 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 PRKG2Q13237 762 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 DNASE1L3Q13609 305 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 TUBA3CQ13748 450 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 GRB14Q14449 540 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 TRIM16LQ309B1 348 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 RAP1GAP2Q684P5 730 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 BEND5Q7L4P6 421 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 ZDHHC13Q8IUH4 622 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 LRRC49Q8IUZ0 686 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 CADM3Q8N126 398 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 C10orf111Q8N326 155 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 LEMD2Q8NC56 503 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 NDNFQ8TB73 568 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 CNIH3Q8TBE1 160 aa12.24□□□□□ -0.45
NUP88-201ENST00000225696 HDAC2Q92769 488 aaKnown RBP12.24□□□□□ -0.45
NUP88-201ENST00000225696 SLC39A13Q96H72 371 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms