RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 GPR158Q5T848 1215 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 GARNL3Q5VVW2 1013 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 CHST15Q7LFX5 561 aaPredicted RBP12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 CRYBG2Q8N1P7 616 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 AKAP1Q92667 903 aaKnown RBP eCLIP12.02□□□□□ -0.482e-8■■■■■ 46.2
TSPAN9-201ENST00000011898 PKP2Q99959 881 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 MLPHQ9BV36 600 aaPredicted RBP12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 USP29Q9HBJ7 922 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 PNPLA8Q9NP80 782 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 PIGVQ9NUD9 493 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 ADPRHL2Q9NX46 363 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 CDC14AQ9UNH5 594 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 ABCG2Q9UNQ0 655 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 PLXNB2O15031 1838 aa12.02□□□□□ -0.48
TSPAN9-201ENST00000011898 A0A0J9YYE9 177 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 CD3EAPO15446 510 aaKnown RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 RFPL1O75677 317 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 CPSF4O95639 269 aaKnown RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 IRF9Q00978 393 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 HECTD2Q5U5R9 776 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 CLEC6AQ6EIG7 209 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 ZNF605Q86T29 641 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 GPR152Q8TDT2 470 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 ZNF296Q8WUU4 475 aaPredicted RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 POF1BQ8WVV4 589 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 HAPLN2Q9GZV7 340 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 PCDHAC1Q9H158 963 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 FBXW11Q9UKB1 542 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 PLCL2Q9UPR0 1127 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 NEMP2A6NFY4 417 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 SCAMP3O14828 347 aaKnown RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 SEPT4O43236 478 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 THOP1P52888 689 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 OLIG2Q13516 323 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 GALNT3Q14435 633 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 KRT74Q7RTS7 529 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 TAC4Q86UU9 113 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 ADHFE1Q8IWW8 467 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 OR52B2Q96RD2 323 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 FEM1AQ9BSK4 669 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 AGO3Q9H9G7 860 aaKnown RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 RDH8Q9NYR8 311 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 SIRPGQ9P1W8 387 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 EBF1Q9UH73 591 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 LEF1Q9UJU2 399 aaPredicted RBP12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 PSAT1Q9Y617 370 aa12.02□□□□□ -0.49
TSPAN9-201ENST00000011898 URB1O60287 2271 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 A8MX80 341 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 MZF1P28698 734 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 ITGA1P56199 1179 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 SIM2Q14190 667 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 KCNJ8Q15842 424 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 PSMD5Q16401 504 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 OR4L1Q8NH43 312 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 CHCHD6Q9BRQ6 235 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 RASSF1Q9NS23 344 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 KLQ9UEF7 1012 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 CNTN6Q9UQ52 1028 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 CENPBD1B2RD01 187 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 CLIC3O95833 236 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 PRDX6P30041 224 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 CLDN10P78369 228 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 C16orf59Q7L2K0 433 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 PHTF2Q8N3S3 785 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 SMG8Q8ND04 991 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 HEXDCQ8WVB3 486 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 BPIFA1Q9NP55 256 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 POLR3BQ9NW08 1133 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 NUP50Q9UKX7 468 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 C9JVG2 144 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 B3GALNT1O75752 331 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 KDM4BO94953 1096 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 MLYCDO95822 493 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 SERPIND1P05546 499 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 OR4Q2P0C623 313 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 AOC1P19801 751 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 ENDOUP21128 410 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 GRK4P32298 578 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 SCN1BQ07699 218 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 MERTKQ12866 999 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 MED22Q15528 200 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 SPDYE7PQ495Y7 208 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 ERAP2Q6P179 960 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 IKBIPQ70UQ0 350 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 MMAAQ8IVH4 418 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 TRIM48Q8IWZ4 208 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 PIK3C3Q8NEB9 887 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 ACTRT2Q8TDY3 377 aa12.01□□□□□ -0.49
TSPAN9-201ENST00000011898 IFT80Q9P2H3 777 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms