RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gria2P23819 883 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 PlaaP27612 794 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ptger1P35375 405 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 ItkQ03526 625 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Lrrc47Q505F5 581 aaKnown RBP18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Kir3dl2Q673W2 388 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Rundc3bQ6PDC0 408 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Olfr20Q7TRX9 314 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Lacc1Q8BZT9 430 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 AcmsdQ8R519 336 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Srfbp1Q9CZ91 441 aaKnown RBP18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Znrf4Q9DAH2 327 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Htr3bQ9JHJ5 437 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 MkksQ9JI70 570 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Cyb561d2Q9WUE3 222 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Pld1Q9Z280 1074 aa18.12■□□□□ 0.49
Trim47-202ENSMUST00000106441 Man1b1A2AJ15 658 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Adcy1O88444 1118 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 SrgnP13609 152 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Cxcl12P40224 93 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Adamts8P57110 905 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ebf1Q07802 591 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 SbplQ3TUY3 232 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Afg1lQ3V384 480 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Q5EBG8 199 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ifit3Q64345 403 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Fstl5Q8BFR2 847 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Krt75Q8BGZ7 551 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ptk7Q8BKG3 1062 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Slc41a2Q8BYR8 573 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Taf10Q8K0H5 218 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Batf2Q8R1H8 277 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ptcd2Q8R3K3 381 aaKnown RBP18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Epm2aip1Q8VEH5 606 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 VitQ8VHI5 650 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Smim14Q91VT8 99 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Glod4Q9CPV4 298 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Tmem53Q9D0Z3 276 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Slc7a8Q9QXW9 531 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gm28363A0A087WQW2 129 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gm3147A0A0J9YU88 481 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gm10424A0A0J9YVD0 481 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Arhgap36B1AUC7 590 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Rrn3B2RS91 656 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Zscan5bB2RTN3 468 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 4930444G20RikD3Z741 495 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gm7971J3QMM8 481 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 C1qbP14106 253 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Hmga1P17095 107 aaKnown RBP18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Eno2P17183 434 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Tgm2P21981 686 aaKnown RBP18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Polr3bP59470 1133 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Pip5k1bP70181 539 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Irf7P70434 457 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 DtlQ3TLR7 729 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ccdc116Q80X53 541 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Prdx6bQ8BG37 224 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Sept11Q8C1B7 431 aaKnown RBP18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Nckap1lQ8K1X4 1134 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gspt1Q8R050 636 aaKnown RBP18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Olfr183Q8VFB9 309 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Txndc9Q9CQ79 226 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Yae1d1Q9DAY6 216 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Jam2Q9JI59 298 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 MgamB5THE2 1827 aa18.11■□□□□ 0.49
Trim47-202ENSMUST00000106441 Tmem233D3Z1U7 110 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Olfr726E9Q8X3 321 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Speer4cG3UXD1 256 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Grip2G3XA20 1042 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gm20828J3KMI7 228 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gm10354K7N6A0 256 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Olfr1022L7MTT3 315 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Sema6aO35464 1031 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Acvr1P37172 509 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 DckP43346 260 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 NadkP58058 439 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Lrrc3P59034 257 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Naa20P61600 178 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Ldb1P70662 411 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Olfr725Q05A45 321 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 PrlrQ08501 608 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Lrrc58Q3UGP9 366 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Dnajc15Q78YY6 149 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Vtcn1Q7TSP5 283 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Rnf38Q8BI21 518 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Sfr1Q8BP27 319 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Q8BP99 230 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Vps26bQ8C0E2 336 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Vps50Q8CI71 964 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Cdhr5Q8VHF2 831 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Barhl2Q8VIB5 384 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Gmpr2Q99L27 348 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 March2Q99M02 246 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 St7Q99M96 577 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Mcm8Q9CWV1 833 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Pbld2Q9CXN7 288 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 CutalQ9D1U5 156 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Cpxm2Q9D2L5 764 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 Cdh13Q9WTR5 714 aa18.1■□□□□ 0.49
Trim47-202ENSMUST00000106441 PolP11369 1281 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms