RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Nr1h2Q60644 446 aa15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 Olfr297Q7TS07 310 aa15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 UnkQ8BL48 810 aaKnown RBP15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 Znrf4Q9DAH2 327 aa15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 P33monoxQ9DBN4 303 aa15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 CtszQ9WUU7 306 aa15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 CpqQ9WVJ3 470 aa15.83■□□□□ 0.13
Ckap4-201ENSMUST00000053871 Phf11cB4XVP9 339 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Gm5145F8VQ88 278 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Ackr2O08707 378 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 PbsnO08976 174 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Sod3O09164 251 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Ca8P28651 291 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Arf5P84084 180 aaKnown RBP15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 GaltQ03249 379 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 PrlrQ08501 608 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 HexdcQ3U4H6 486 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fam129aQ3UW53 926 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fam189bQ5HZJ5 669 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Tnfaip2Q61333 691 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Ca4Q64444 305 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Tgm6Q8BM11 706 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Abi3Q8BYZ1 367 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Sept11Q8C1B7 431 aaKnown RBP15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Casp9Q8C3Q9 454 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Olfr1019Q8VGS3 310 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Pcdhgc3Q91XX1 934 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 XpotQ9CRT8 963 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fads3Q9JJE7 449 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 GabrqQ9JLF1 638 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 L3mbtl1A2A5N8 826 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Lipo4D3Z608 396 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 E030030I06RikJ3QML9 246 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Bnc1O35914 961 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 MaffO54791 156 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 GsnP13020 780 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Anxa6P14824 673 aaKnown RBP15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Dlx2P40764 332 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 ClgnP52194 611 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fitm2P59266 262 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Axdnd1Q3UZ57 424 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fam126bQ8C729 530 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Snx8Q8CFD4 459 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Ints10Q8K2A7 710 aaKnown RBP15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Capn8Q91VA3 703 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Rrp15Q9CYX7 281 aaKnown RBP15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Pinx1Q9CZX5 332 aaKnown RBP15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Rgs3Q9DC04 966 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Vmn1r65Q9EPS7 332 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Cmtm7Q9ESD6 167 aa15.83■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Lgr4A2ARI4 951 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Nipsnap3aB1AWZ3 247 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Gm2237E9Q501 211 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Gm17175E9Q528 179 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fam181aJ3QNB7 292 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Gm3591K7N6X2 186 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Sp1O89090 784 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Rb1P13405 921 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Hsd17b4P51660 735 aaKnown RBP15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Jak1P52332 1153 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Adamts19P59509 1210 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Rps17P63276 135 aaKnown RBP15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 TekQ02858 1122 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Cyp4f37Q3V1F1 546 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Kpna1Q60960 538 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Epb41l5Q8BGS1 731 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 HadhaQ8BMS1 763 aaKnown RBP15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 ThtpaQ8JZL3 224 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Olfr345Q8VGK4 311 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Il1rl2Q9ERS7 574 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Pkp3Q9QY23 797 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Wdr54Q9R0D8 334 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 HephQ9Z0Z4 1157 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Fam43bA2AM80 330 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Itga8A2ARA8 1062 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Armc4B2RY50 1037 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Smad6O35182 495 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Esr1P19785 599 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Il1rnP25085 178 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Rpl26P61255 145 aaKnown RBP15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Abraxas2Q3TCJ1 415 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Inppl1Q6P549 1257 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Zfp595Q8BIN6 625 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Serpinb9dQ8BMT0 377 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Tmem252Q8C353 183 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Glcci1Q8K3I9 537 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Htatip2Q9Z2G9 242 aa15.82■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Gm4847G3X946 537 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 NapsaO09043 419 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Krt1P04104 637 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Pax3P24610 479 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 MaxP28574 160 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Ptpn5P54830 541 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 AdprhP54923 362 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 CenplQ3U3S3 329 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Tnks2Q3UES3 1166 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Nod1Q8BHB0 953 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 Ftsj1Q8CBC7 324 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 IlkapQ8R0F6 392 aa15.81■□□□□ 0.12
Ckap4-201ENSMUST00000053871 HnrnpllQ921F4 591 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 389.2 ms