RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 PfplQ5RKV8 702 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Irf4Q64287 450 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tmem151aQ6GQT5 468 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 MregQ6NVG5 214 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Sema3dQ8BH34 777 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tmem108Q8BHE4 574 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Efemp1Q8BPB5 493 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Osbpl6Q8BXR9 959 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tfb1mQ8JZM0 345 aaKnown RBP8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Spats2lQ91WJ7 558 aaKnown RBP8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Atoh8Q99NA2 322 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 5530400C23RikQ9D3I0 173 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cyp3a44Q9EQW4 504 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Prokr1Q9JKL1 393 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tnip3A0A1D5RMN0 279 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm3159K7N760 267 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 PtgdsO09114 189 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 DgkaO88673 730 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Zfp1P08042 402 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 FasP25446 327 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 SgcgP82348 291 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Serping1P97290 504 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Zfyve27Q3TXX3 415 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Usp30Q3UN04 517 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Naa11Q3UX61 218 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 NovQ64299 354 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ca4Q64444 305 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 ProcrQ64695 242 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 BegainQ68EF6 600 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Fam149b1Q6NSV7 578 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Cand2Q6ZQ73 1235 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Olfr664Q7TRP5 306 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Q8VDP2 222 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 CrebzfQ91ZR3 358 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tspan1Q99J59 240 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Psip1Q99JF8 528 aaKnown RBP8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Txndc12Q9CQU0 170 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Dach1Q9QYB2 751 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ndrg2Q9QYG0 371 aaKnown RBP8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Piezo2Q8CD54 2822 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rev3lQ61493 3122 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm3594E9Q2A7 267 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Nedd9O35177 833 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc1a6O35544 561 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pknox1O70477 436 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 LdlrP35951 862 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Csrp3P50462 194 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Defa-rs12P50716 91 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ephb2P54763 986 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 NxnP97346 435 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Bpifa1P97361 278 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Qsox2Q3TMX7 692 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 AW551984Q8BGF0 804 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Scamp1Q8K021 338 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tceal1Q921P9 165 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Trim8Q99PJ2 551 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Creb3l4Q9D2A5 370 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Snrnp48Q9D361 337 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc5a3Q9JKZ2 718 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kcne5Q9QZ26 143 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gbp2Q9Z0E6 589 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ate1Q9Z2A5 516 aa8.6□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm4969D3YZT1 566 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gcm2O09102 504 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gstm1P10649 218 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kif5aP33175 1027 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Agtr2P35374 363 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kcnj9P48543 393 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 SnnP61807 88 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Anxa4P97429 319 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 DselQ0VBN2 1207 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Rslcan18Q7M6X5 460 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kiaa1671Q8BRV5 308 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Trim14Q8BVW3 440 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc5a11Q8K0E3 673 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ankrd49Q8VE42 238 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Asb18Q8VHA6 467 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Tcam1Q99NB3 548 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ssxb1Q9CPU1 170 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ppp6cQ9CQR6 305 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ppil1Q9D0W5 166 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Zfp212G3X8R7 492 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Slc9a3G3X939 829 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Gm5814J3QP80 125 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Serpini1O35684 410 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 P01669 111 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Krt4P07744 525 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 MutP16332 748 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Timp2P25785 220 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Fcgr1P26151 404 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Adra2bP30545 450 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Arl1P61211 181 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 DtlQ3TLR7 729 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Ntrk1Q3UFB7 799 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Itih3Q61704 889 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Kansl1Q80TG1 1036 aaKnown RBP8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Pcmtd2Q8BHD8 359 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Zbtb46Q8BID6 600 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 ItchQ8C863 864 aa8.59□□□□□ -1.03
Trim39-201ENSMUST00000042717 Exd1Q8CDF7 570 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms