RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Bub1O08901 1058 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Phox2bO35690 314 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dnaja1P63037 397 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cdkl4Q3TZA2 342 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Serac1Q3U213 654 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ubtfl1Q3USZ2 394 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 B3gnt3Q5JCS9 372 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm11437Q5QR91 290 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 LaynQ8C351 381 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr458Q8VF80 313 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr457Q8VGP5 313 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zdhhc7Q91WU6 308 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pramef25A2ASI9 494 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm10801F7C7Q0 168 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kpna3O35344 521 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gpat2Q14DK4 801 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ints6Q6PCM2 883 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Timmdc1Q8BUY5 285 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Snx4Q91YJ2 450 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 ItpaQ9D892 198 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 EefsecQ9JHW4 583 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm21293E9Q4G9 266 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 H2-M11F6U8V3 335 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8229K7N749 213 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Impa1O55023 277 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vcam1P29533 739 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 MazP56671 477 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 IdsQ08890 552 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mfsd3Q5U419 412 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tll1Q62381 1013 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 DazlQ64368 298 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr1037Q7TR84 321 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Elmo1Q8BPU7 727 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dennd1cQ8CFK6 786 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr801Q8VEU1 318 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nprl3Q8VIJ8 569 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fars2Q99M01 451 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Exosc1Q9DAA6 195 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nt5cQ9JM14 200 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Atp6ap1Q9R1Q9 463 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Xrn1P97789 1719 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Klhdc7aA2APT9 773 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Prom1O54990 867 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fabp3P11404 133 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tmem209Q8BRG8 561 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Efcab7Q8VDY4 628 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Adam25Q9R159 760 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm6882J3KMT3 313 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm10662Q3UT86 313 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dnaaf3Q3UYV8 586 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc22a15Q504N2 544 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pcp4l1Q6W8Q3 68 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ints7Q7TQK1 966 aaKnown RBP10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ap4e1Q80V94 1122 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Trim69Q80X56 500 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Znf410Q8BKX7 478 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Svs2Q8BS30 375 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp62Q8C827 914 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pcdhga9Q91XX9 932 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm5485A0A1D5RM98 91 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn2r29L7N2D4 852 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ripk1Q60855 656 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Entpd3Q8BFW6 529 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tmem198Q8BG75 360 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 BpifcQ8C186 509 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gpr158Q8C419 1200 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dclre1cQ8K4J0 705 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pbdc1Q9D0B6 198 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bin3Q9JI08 253 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Spin2gA0A0N4SW15 236 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp808B8JJZ4 753 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Spin2eJ3QNQ0 234 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Smim22J3QP37 91 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Psmc3ipO35047 217 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 TdgP56581 421 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 AbrQ5SSL4 859 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nomo1Q6GQT9 1214 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 AY358078Q6UY53 465 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Trmt2bQ8BQJ6 493 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam46bQ8C152 427 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Piwil2Q8CDG1 971 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hist1h2aaQ8CGP4 129 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Uqcrc1Q9CZ13 480 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nek6Q9ES70 313 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gsk3bQ9WV60 420 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mrgpra2aA0A0R4J1Z0 331 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Eif2b3B1AUN2 452 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn2r118E9Q1C1 853 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Obox5G3X9P6 291 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Chst3O88199 472 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 JunbP09450 344 aaKnown RBP10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mup4P11590 178 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Elf3Q3UPW2 391 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 AcdQ5EE38 416 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 PdprQ7TSQ8 878 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc45a3Q8K0H7 553 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Il36gQ8R460 164 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tmprss4Q8VCA5 435 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp61Q923D1 555 aa10.04□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ndufb5Q9CQH3 189 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms