RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ZNF23P17027 643 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 OR1D2P34982 312 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 RPS6KA3P51812 740 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 POLR2JP52435 117 aaKnown RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 RIN3Q8TB24 985 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 WFDC5Q8TCV5 224 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 ZUFSPQ96AP4 578 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 ASB2Q96Q27 587 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 NSUN3Q9H649 340 aaKnown RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 EBF1Q9UH73 591 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 OR6C75A6NL08 312 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 FFAR3O14843 346 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 GPR42O15529 346 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 B4GAT1O43505 415 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 CA12O43570 354 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 VPS26AO75436 327 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 TMCC1O94876 653 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 SEC24AO95486 1093 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 CDK4P11802 303 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 FASP25445 335 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 IL2P60568 153 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 RFTN2Q52LD8 501 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 OTUD3Q5T2D3 398 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 CXorf57Q6NSI4 855 aaKnown RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 IL27RAQ6UWB1 636 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 FAM151BQ6UXP7 276 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 LYSMD3Q7Z3D4 306 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 PCSK9Q8NBP7 692 aaKnown RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 PEX13Q92968 403 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 GLT1D1Q96MS3 346 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 SLC22A12Q96S37 553 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 FARSBQ9NSD9 589 aaKnown RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 ZNF840PA6NDX5 716 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 TBC1D4O60343 1298 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 TRMUO75648 421 aaKnown RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 IL10P22301 178 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 MERTKQ12866 999 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 ZIK1Q3SY52 487 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 TMEM214Q6NUQ4 689 aaKnown RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 ZBTB46Q86UZ6 589 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 FAM86B1Q8N7N1 296 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 VPS50Q96JG6 964 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 GID8Q9NWU2 228 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 CDC14AQ9UNH5 594 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 AQP12BA6NM10 295 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 UROSP10746 265 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 PAX3P23760 479 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 CALRP27797 417 aaKnown RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 CDH4P55283 916 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 NKX3-2P78367 333 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 PPP1R8Q12972 351 aaKnown RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 ZNF177Q13360 481 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 INPP5AQ14642 412 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 PTGR1Q14914 329 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 ABRAXAS2Q15018 415 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 SLC44A4Q53GD3 710 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 ANKRD34AQ69YU3 496 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 TTC33Q6PID6 262 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 DNAJC14Q6Y2X3 702 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-223ENST00000641597 LPCAT2Q7L5N7 544 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 CAMK1DQ8IU85 385 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 AQP12AQ8IXF9 295 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 RNF145Q96MT1 663 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 MRGBPQ9NV56 204 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 UTS2RQ9UKP6 389 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
PHGDH-223ENST00000641597 NUP214P35658 2090 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 GALTP07902 379 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 VARSP26640 1264 aaKnown RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 ALDH3B2P48448 385 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 SLC11A2P49281 568 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 MAPK10P53779 464 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 IST1P53990 364 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 OGFOD2Q6N063 350 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 MBOAT1Q6ZNC8 495 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 BBS5Q8N3I7 341 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 CARNMT1Q8N4J0 409 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 TTC30BQ8N4P2 665 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 TRPV3Q8NET8 790 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 METTL6Q8TCB7 284 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 BIRC7Q96CA5 298 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 CENPNQ96H22 339 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 DCUN1D5Q9BTE7 237 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 CLK4Q9HAZ1 481 aaKnown RBP16.61■□□□□ 0.25
PHGDH-223ENST00000641597 COMMD10Q9Y6G5 202 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 PRSS21Q9Y6M0 314 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 PIKFYVEQ9Y2I7 2098 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 THSD7BQ9C0I4 1608 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 MOXD2PA6NHM9 499 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 TBKBP1A7MCY6 615 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 H0YJX3 145 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 OR7A17O14581 309 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 KLK8O60259 260 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 STT3AP46977 705 aa16.61■□□□□ 0.25
PHGDH-223ENST00000641597 HSPA7P48741 367 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms