RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TRMT6Q9UJA5 497 aaKnown RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TMEM98Q9Y2Y6 226 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 PCDHGA5Q9Y5G8 931 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 DMXL1Q9Y485 3027 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 SPTBN2O15020 2390 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 FAM95CA0A1B0GW59 222 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 PRSS38A1L453 326 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 GAPDHSO14556 408 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 DYNC1I1O14576 645 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 TNFRSF10CO14798 259 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 VILLO15195 856 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 GRID2O43424 1007 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 CDH16O75309 829 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 APOA4P06727 396 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 NUDT17P0C025 328 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 PRSS56P0CW18 603 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 PKMP14618 531 aaKnown RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 RPS3P23396 243 aaKnown RBP eCLIP12.79□□□□□ -0.366e-8■■■■□ 26.6
PHGDH-218ENST00000641491 SLCO1A2P46721 670 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 CDKN1CP49918 316 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 SERPINB8P50452 374 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 PFN3P60673 137 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 SRP54P61011 504 aaKnown RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 ILF3Q12906 894 aaKnown RBP eCLIP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 BIRC2Q13490 618 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 USP10Q14694 798 aaKnown RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 CASP8Q14790 479 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 EFTUD2Q15029 972 aaKnown RBP eCLIP12.79□□□□□ -0.364e-6■■■■□ 21.9
PHGDH-218ENST00000641491 PLA2G4EQ3MJ16 856 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 BEND6Q5SZJ8 279 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 CEP85LQ5SZL2 805 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 LRIG3Q6UXM1 1119 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 OTOAQ7RTW8 1153 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 ELMO1Q92556 727 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 NELL1Q92832 810 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 COX14Q96I36 57 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 OR2M4Q96R27 311 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 RBBP8Q99708 897 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 FUT8Q9BYC5 575 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 OSGEPL1Q9H4B0 414 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 ATXN10Q9UBB4 475 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 FAM8A1Q9UBU6 413 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 TLK1Q9UKI8 766 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 WDR87Q6ZQQ6 2873 aa12.79□□□□□ -0.36
PHGDH-218ENST00000641491 KMT2BQ9UMN6 2715 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-218ENST00000641491 KHNYNO15037 678 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 YKT6O15498 198 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 OR1I1O60431 355 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 LILRB5O75023 590 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 CER1O95813 267 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SOD1P00441 154 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SNRPAP09012 282 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 H2AFXP16104 143 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 STMN1P16949 149 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ITGB6P18564 788 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 POLD2P49005 469 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 CSNK1EP49674 416 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 RGS4P49798 205 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 LIMK2P53671 638 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ADARP55265 1226 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 HNRNPKP61978 463 aaKnown RBP eCLIP12.78□□□□□ -0.363e-7■□□□□ 8.5
PHGDH-218ENST00000641491 POU4F1Q01851 419 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 LRP8Q14114 963 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 BOP1Q14137 746 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 HSP90B2PQ58FF3 399 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ZNF648Q5T619 568 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ADGRG6Q86SQ4 1221 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 AMZ2Q86W34 360 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SLC44A1Q8WWI5 657 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 LPGAT1Q92604 370 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 TMEM159Q96B96 161 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SGF29Q96ES7 293 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 BMFQ96LC9 184 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 FOPNLQ96NB1 174 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 CCM2Q9BSQ5 444 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 BOCQ9BWV1 1114 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 GSDMCQ9BYG8 508 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SPATS2LQ9NUQ6 558 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 APOBEC3BQ9UH17 382 aaKnown RBP12.78□□□□□ -0.36
PHGDH-218ENST00000641491 TBK1Q9UHD2 729 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ZNF180Q9UJW8 692 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 PILRBQ9UKJ0 227 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SLC39A10Q9ULF5 831 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SUFUQ9UMX1 484 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 GPR34Q9UPC5 381 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 ANKRD6Q9Y2G4 727 aa12.78□□□□□ -0.36
PHGDH-218ENST00000641491 SPTY2D1-AS1A0A0U1RR47 76 aa12.77□□□□□ -0.37
PHGDH-218ENST00000641491 A0A1B0GVT2 93 aa12.77□□□□□ -0.37
PHGDH-218ENST00000641491 AGAP14A8MT82 685 aa12.77□□□□□ -0.37
PHGDH-218ENST00000641491 CXorf49A8MYA2 514 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-218ENST00000641491 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-218ENST00000641491 NUAK1O60285 661 aa12.77□□□□□ -0.37
PHGDH-218ENST00000641491 OPA1O60313 960 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms