RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GOT2P00505 430 aaKnown RBP26.26■■□□□ 1.79
VEGFA-231ENST00000640499 BRAFP15056 766 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 PNLIPP16233 465 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 PAFAH1B1P43034 410 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 CCL7P80098 99 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 SEMA3AQ14563 771 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 INSCQ1MX18 579 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 CACTIN-AS1Q8N1I8 211 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 OR6C4Q8NGE1 309 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 SLC37A2Q8TED4 501 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 PEX13Q92968 403 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 COPS8Q99627 209 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 TRIM56Q9BRZ2 755 aaKnown RBP26.26■■□□□ 1.79
VEGFA-231ENST00000640499 CHD8Q9HCK8 2581 aa26.26■■□□□ 1.79
VEGFA-231ENST00000640499 GOLGA8MH3BSY2 632 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 AP3B1O00203 1094 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 ARNTP27540 789 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 MAGEA3P43357 314 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 TARDBPQ13148 414 aaKnown RBP eCLIP26.25■■□□□ 1.793e-6■■■■□ 20.1
VEGFA-231ENST00000640499 NR1D2Q14995 579 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 BCL7AQ4VC05 210 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 CES3Q6UWW8 571 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 TAS2R42Q7RTR8 314 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 Q8N9G6 341 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-231ENST00000640499 MFSD3Q96ES6 412 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 SGSM3Q96HU1 749 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 SERPINB12Q96P63 405 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 ABCG4Q9H172 646 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 WDR37Q9Y2I8 494 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 DNMT3AQ9Y6K1 912 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-231ENST00000640499 PRSS21Q9Y6M0 314 aa26.25■■□□□ 1.79
VEGFA-231ENST00000640499 CCDC188H7C350 402 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 MLNP12872 115 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 F3P13726 295 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 ATP1B2P14415 290 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-231ENST00000640499 JUPP14923 745 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 FASLGP48023 281 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 DMPKQ09013 629 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 ZNF658BQ4V348 819 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-231ENST00000640499 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-231ENST00000640499 SPRED1Q7Z699 444 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 C16orf45Q96MC5 204 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-231ENST00000640499 OSGEPL1Q9H4B0 414 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 MRM3Q9HC36 420 aaKnown RBP26.24■■□□□ 1.79
VEGFA-231ENST00000640499 ZNF624Q9P2J8 865 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-231ENST00000640499 SOX13Q9UN79 622 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 CLCA2Q9UQC9 943 aa26.24■■□□□ 1.79
VEGFA-231ENST00000640499 ASPMQ8IZT6 3477 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 DNALI1O14645 258 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-231ENST00000640499 PDX1P52945 283 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 DRG2P55039 364 aaKnown RBP26.23■■□□□ 1.79
VEGFA-231ENST00000640499 DR1Q01658 176 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 NFE2L1Q14494 772 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 AFTPHQ6ULP2 937 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 ABRAXAS1Q6UWZ7 409 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 AMZ2Q86W34 360 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 JAMLQ86YT9 394 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 CCNJLQ8IV13 435 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 PPIL6Q8IXY8 311 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 CLDN19Q8N6F1 224 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 OR4L1Q8NH43 312 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 ZNF514Q96K75 400 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-231ENST00000640499 LINC00615Q96LM1 132 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-231ENST00000640499 TRIM51Q9BSJ1 452 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 LRRN3Q9H3W5 708 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 MARCH4Q9P2E8 410 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-231ENST00000640499 ASIC3Q9UHC3 531 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 UNC13CQ8NB66 2214 aa26.23■■□□□ 1.79
VEGFA-231ENST00000640499 C1QTNF9BB2RNN3 333 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 TP73O15350 636 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 TTI1O43156 1089 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 RPLP0P05388 317 aaKnown RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 C1QTNF9P0C862 333 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 RPL10P27635 214 aaKnown RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 OR1D5P58170 312 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 UBE2IP63279 158 aaKnown RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 MRPS25P82663 173 aaKnown RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 CLCA4Q14CN2 919 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 SEPT7Q16181 437 aaKnown RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 AGAP9Q5VTM2 703 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 WASH2PQ6VEQ5 465 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 TMPRSS9Q7Z410 1059 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 LILRA3Q8N6C8 439 aaPredicted RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 SPATA4Q8NEY3 305 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 OR6P1Q8NGX9 317 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 HEXDCQ8WVB3 486 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 DCUN1D1Q96GG9 259 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 SIGLEC10Q96LC7 697 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 FCRL3Q96P31 734 aaPredicted RBP26.22■■□□□ 1.79
VEGFA-231ENST00000640499 KRT12Q99456 494 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 WASH6PQ9NQA3 447 aa26.22■■□□□ 1.79
VEGFA-231ENST00000640499 PRAMEF33A0A0G2JMD5 474 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 MGAT4DA6NG13 374 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 OR1I1O60431 355 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 KCNJ13O60928 360 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 CAPNS1P04632 268 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 PBLDP30039 288 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-231ENST00000640499 SLC19A1P41440 591 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 PRLHRP49683 370 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 SARNPP82979 210 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms