RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 GRIK2Q13002 908 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CBX2Q14781 532 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 C6orf136Q5SQH8 315 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ANKRD34AQ69YU3 496 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 NIPAL1Q6NVV3 410 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 BTLAQ7Z6A9 289 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ZFAND4Q86XD8 727 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SCN4BQ8IWT1 228 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HS3ST5Q8IZT8 346 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 C8orf59Q8N0T1 100 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 TEX26Q8N6G2 289 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CDYL2Q8N8U2 506 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 NLGN2Q8NFZ4 835 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ITFG1Q8TB96 612 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ZC3H15Q8WU90 426 aaKnown RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SERPINB11Q96P15 392 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CDK15Q96Q40 435 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HBEGFQ99075 208 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 GPR21Q99679 349 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 NUSAP1Q9BXS6 441 aaKnown RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 DGCR6LQ9BY27 220 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 RAD21L1Q9H4I0 556 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SYTL2Q9HCH5 934 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 PCDHB3Q9Y5E6 796 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 PCDHGA8Q9Y5G5 932 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 F8W810 466 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 PRSS23O95084 383 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 CTSHP09668 335 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 RAP2AP10114 183 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 RHOQP17081 205 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 OGNP20774 298 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 IDUAP35475 653 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 OPRL1P41146 370 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 MTHFRP42898 656 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 MRPL19P49406 292 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 GSTM4Q03013 218 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TUBA3CQ13748 450 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 MEP1AQ16819 746 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 AAK1Q2M2I8 961 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 MS4A13Q5J8X5 152 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TAF2Q6P1X5 1199 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 DLEU7Q6UYE1 221 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 NCCRP1Q6ZVX7 275 aaPredicted RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 PIWIL3Q7Z3Z3 882 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 ABHD11Q8NFV4 315 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 GTF3C2Q8WUA4 911 aaPredicted RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 IGSF8Q969P0 613 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TDRD1Q9BXT4 1180 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 HPS4Q9NQG7 708 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TMEM248Q9NWD8 314 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 ZIM2Q9NZV7 527 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 EIF2B4Q9UI10 523 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 DNAH12Q6ZR08 3092 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 LCHNA4D1U4 455 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 NOBOXO60393 691 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TULP3O75386 442 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 ITGB1P05556 798 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 ANXA6P08133 673 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 GSTM2P28161 218 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 RPL9P32969 192 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 PIGAP37287 484 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 DGKQP52824 942 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TPD52P55327 224 aaPredicted RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 CHRNB3Q05901 458 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 RAD51Q06609 339 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 CD300CQ08708 224 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 PPP1R8Q12972 351 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 PRKG2Q13237 762 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 SKIV2LQ15477 1246 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TYSND1Q2T9J0 566 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 FAM98BQ52LJ0 330 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 RBM48Q5RL73 367 aaKnown RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 OVOS1Q6IE37 1185 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 CD300LGQ6UXG3 332 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 Q6ZSR9 355 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 SPATA2LQ8IUW3 424 aaPredicted RBP10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TMCO5AQ8N6Q1 288 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 FKBP10Q96AY3 582 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 CDKN2AIPNLQ96HQ2 116 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 C1orf74Q96LT6 269 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 FUNDC2Q9BWH2 189 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 TAS2R13Q9NYV9 303 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 CPA4Q9UI42 421 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 UTS2RQ9UKP6 389 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
SNIP1-204ENST00000638725 MYO16Q9Y6X6 1858 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 AXIN1O15169 862 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 XYLBO75191 536 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 FGF1P05230 155 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 HLA-DPA1P20036 260 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 AGXTP21549 392 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ACVRL1P37023 503 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ARL1P40616 181 aaPredicted RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 HTR6P50406 440 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 LAPTM5Q13571 262 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 NKG7Q16617 165 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 CTU2Q2VPK5 515 aaKnown RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 RAP1GAP2Q684P5 730 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 SULT1C3Q6IMI6 304 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 CHDHQ8NE62 594 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms