RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SLMAPQ14BN4 828 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 KYNUQ16719 465 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 FAM153CQ494X1 144 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 BCL7AQ4VC05 210 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 PRRT3Q5FWE3 981 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 RNF187Q5TA31 235 aaPredicted RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 WDR93Q6P2C0 686 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 TMEM220Q6QAJ8 160 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 CRTC3Q6UUV7 619 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 CYS1Q717R9 158 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 DET1Q7L5Y6 550 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 LRRTM4Q86VH4 590 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 TRAPPC5Q8IUR0 188 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 ZNF547Q8IVP9 402 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 DENND6AQ8IWF6 608 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 CNTN4Q8IWV2 1026 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 ZNF548Q8NEK5 533 aaPredicted RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 SGF29Q96ES7 293 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 LRRC61Q9BV99 259 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 TMEM168Q9H0V1 697 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 CDC42EP4Q9H3Q1 356 aaKnown RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 TMEM9BQ9NQ34 198 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 PPANQ9NQ55 473 aaKnown RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 INTS10Q9NVR2 710 aaKnown RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 TRNAU1APQ9NX07 287 aaKnown RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 SPASTQ9UBP0 616 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 GPSM3Q9Y4H4 160 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 TCRBV9S1A1TA0A576 114 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 OR2AG2A6NM03 316 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 PRMT5O14744 637 aaPredicted RBP15.77■□□□□ 0.12
CLN6-216ENST00000636876 SDC3O75056 442 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 AP2A2O94973 939 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 S1PR4O95977 384 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 CTSEP14091 401 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 DGKAP23743 735 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 FOXK2Q01167 660 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 CTBP1Q13363 440 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 C1orf61Q13536 156 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 TEDDM1Q5T9Z0 273 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 ZNF449Q6P9G9 518 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 KIAA0408Q6ZU52 694 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 KANSL1Q7Z3B3 1105 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 FSTL5Q8N475 847 aaPredicted RBP15.77■□□□□ 0.12
CLN6-216ENST00000636876 CLDN19Q8N6F1 224 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 C2CD4AQ8NCU7 369 aaPredicted RBP15.77■□□□□ 0.12
CLN6-216ENST00000636876 LMX1AQ8TE12 382 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 NAT14Q8WUY8 206 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 LPGAT1Q92604 370 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 CLPBQ9H078 707 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 VPS37BQ9H9H4 285 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 TM7SF3Q9NS93 570 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 UCKL1Q9NWZ5 548 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 GPR34Q9UPC5 381 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 VPS9D1Q9Y2B5 631 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 PRSS21Q9Y6M0 314 aa15.77■□□□□ 0.12
CLN6-216ENST00000636876 PIKFYVEQ9Y2I7 2098 aa15.77■□□□□ 0.11
CLN6-216ENST00000636876 DNAH14Q0VDD8 3507 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 AQP9O43315 295 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 PCDHGA12O60330 932 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 CELA2BP08218 269 aaPredicted RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 ACP5P13686 325 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 MCM3P25205 808 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 STX2P32856 288 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 PRLHRP49683 370 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 MPP1Q00013 466 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 CTBSQ01459 385 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 ILF3Q12906 894 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLN6-216ENST00000636876 LRP8Q14114 963 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 NAA30Q147X3 362 aaPredicted RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 ELOCQ15369 112 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 TCEA2Q15560 299 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 UBAP2Q5T6F2 1119 aaKnown RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 CHST15Q7LFX5 561 aaPredicted RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 C11orf96Q7Z7L8 435 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 LRRC6Q86X45 466 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 GPBAR1Q8TDU6 330 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 SAP25Q8TEE9 199 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 TIMM29Q9BSF4 260 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 PARD6BQ9BYG5 372 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 TXLNGYQ9BZA5 131 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 P2RY12Q9H244 342 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 FBXO6Q9NRD1 293 aaPredicted RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 ZFATQ9P243 1243 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 SLC17A6Q9P2U8 582 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 PLEKHM1Q9Y4G2 1056 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 PCDHGB2Q9Y5G2 931 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 DNMT3AQ9Y6K1 912 aaPredicted RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 CSNK1G3Q9Y6M4 447 aa15.76■□□□□ 0.11
CLN6-216ENST00000636876 ASCC3Q8N3C0 2202 aaKnown RBP15.76■□□□□ 0.11
CLN6-216ENST00000636876 UBA6A0AVT1 1052 aaPredicted RBP15.75■□□□□ 0.11
CLN6-216ENST00000636876 FAM159BA6NKW6 160 aa15.75■□□□□ 0.11
CLN6-216ENST00000636876 LMO7DNF2Z398 122 aa15.75■□□□□ 0.11
CLN6-216ENST00000636876 QSOX1O00391 747 aa15.75■□□□□ 0.11
CLN6-216ENST00000636876 GDF9O60383 454 aa15.75■□□□□ 0.11
CLN6-216ENST00000636876 POP7O75817 140 aaKnown RBP15.75■□□□□ 0.11
CLN6-216ENST00000636876 ACSL3O95573 720 aa15.75■□□□□ 0.11
CLN6-216ENST00000636876 C1QAP02745 245 aa15.75■□□□□ 0.11
CLN6-216ENST00000636876 F7P08709 466 aaPredicted RBP15.75■□□□□ 0.11
CLN6-216ENST00000636876 RPS3P23396 243 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLN6-216ENST00000636876 LEPRP48357 1165 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms