RNA–Protein interactions for RNA: ENST00000636138.1

CACNA1D-208, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-208ENST00000636138 LEFTY1O75610 366 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ZNF189O75820 626 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ACSL3O95573 720 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 IGSF6O95976 241 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 UGT2B4P06133 528 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ITGA2BP08514 1039 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 MLNP12872 115 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 TIMP2P16035 220 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 POU3F2P20265 443 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 LHCGRP22888 699 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PMS2P54278 862 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 AP1S1P61966 158 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PPP2CBP62714 309 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PPP2CAP67775 309 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 CDK18Q07002 472 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 SFSWAPQ12872 951 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PRPSAP1Q14558 356 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 POU6F1Q14863 301 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 TGIF1Q15583 401 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 HNRNPA1L2Q32P51 320 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 MANEAQ5SRI9 462 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ESRP1Q6NXG1 681 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 CRTC1Q6UUV9 634 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PARS2Q7L3T8 475 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 TSPAN33Q86UF1 283 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 VASH2Q86V25 355 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ATCAYQ86WG3 371 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ZBED8Q8IZ13 594 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 IQCKQ8N0W5 287 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ZNF557Q8N988 423 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 MFSD2AQ8NA29 543 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 WDR36Q8NI36 951 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 FUBP1Q96AE4 644 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 MFSD3Q96ES6 412 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PRR11Q96HE9 360 aaPredicted RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 APOLD1Q96LR9 279 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 KLHL32Q96NJ5 620 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ZIM3Q96PE6 472 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 CPEB1Q9BZB8 566 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PHACTR1Q9C0D0 580 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 SUV39H2Q9H5I1 410 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 UGT1A7Q9HAW7 530 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 UGT1A10Q9HAW8 530 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 UGT1A8Q9HAW9 530 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 CHRAC1Q9NRG0 131 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 TREX1Q9NSU2 369 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 UCKL1Q9NWZ5 548 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 MTRF1LQ9UGC7 380 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 SCML1Q9UN30 329 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ITM2BQ9Y287 266 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 TCAF1Q9Y4C2 921 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 PCDHB11Q9Y5F2 797 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ARL5AQ9Y689 179 aa8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 ZNF106Q9H2Y7 1883 aaKnown RBP8.87□□□□□ -0.99
CACNA1D-208ENST00000636138 RP1P56715 2156 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 CCDC187A0A096LP49 1063 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 A1L4Q6 167 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 MROH6A6NGR9 719 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 OR51F1A6NGY5 319 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 NPIPB15A6NHN6 443 aaPredicted RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 ERI2A8K979 691 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 A8MX80 341 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 GAPDHSO14556 408 aaPredicted RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 CHUKO15111 745 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 PSMD3O43242 534 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 NEBLO76041 1014 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 POP4O95707 220 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 TTC4O95801 387 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 EPOP01588 193 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 ATP5BP06576 529 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 PRSS56P0CW18 603 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 GM2AP17900 193 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 DGKAP23743 735 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 PSMA3P25788 255 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 ELAVL4P26378 380 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 PSMD8P48556 350 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 ZNF140P52738 457 aaPredicted RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 ADPRHP54922 357 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 GEMIN4P57678 1058 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 RAB15P59190 212 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 SNRPD1P62314 119 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 CYP4F2P78329 520 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 RALGDSQ12967 914 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 SLC29A2Q14542 456 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 CST6Q15828 149 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 ANKRD20A4Q4UJ75 823 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 CENPUQ71F23 418 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 BBS5Q8N3I7 341 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 SLC25A45Q8N413 288 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 RYBPQ8N488 228 aaPredicted RBP8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 KDM1BQ8NB78 822 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 OR13C4Q8NGS5 318 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 OR13J1Q8NGT2 312 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 OR14C36Q8NHC7 312 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.86□□□□□ -0.996e-6■■■■■ 28.1
CACNA1D-208ENST00000636138 GRAMD1AQ96CP6 724 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 STAMBPL1Q96FJ0 436 aa8.86□□□□□ -0.99
CACNA1D-208ENST00000636138 CABS1Q96KC9 395 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms