RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SGCDQ92629 289 aa14.66□□□□□ -0.06
CACNA1A-220ENST00000635988 ZNF566Q969W8 418 aa14.66□□□□□ -0.06
CACNA1A-220ENST00000635988 NT5MQ9NPB1 228 aa14.66□□□□□ -0.06
CACNA1A-220ENST00000635988 SMPD4Q9NXE4 827 aa14.66□□□□□ -0.06
CACNA1A-220ENST00000635988 IPPQ9Y573 584 aa14.66□□□□□ -0.06
CACNA1A-220ENST00000635988 WASH4PA8MWX3 477 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 CXCL11O14625 94 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 LDB2O43679 373 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 OXSR1O95747 527 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 PCNAP12004 261 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 HOXD8P13378 290 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 HOXB6P17509 224 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 NFKBIAP25963 317 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 RYKP34925 604 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 TIAL1Q01085 375 aaKnown RBP eCLIP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 KCNAB2Q13303 367 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 SLC2A7Q6PXP3 512 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 DLEU7Q6UYE1 221 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 PNPLA1Q8N8W4 532 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 PROKR1Q8TCW9 393 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 TRPM4Q8TD43 1214 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 SH3RF2Q8TEC5 729 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 ZFP90Q8TF47 636 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 TBATAQ96M53 351 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 CGREF1Q99674 301 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 AARSD1Q9BTE6 412 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 AMBRA1Q9C0C7 1298 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 NDFIP2Q9NV92 336 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 COL4A4P53420 1690 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 LOC100130705A0A1B0GUX0 176 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 FAM92AA1XBS5 289 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 OR51F1A6NGY5 319 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 GNGT2O14610 69 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 XYLBO75191 536 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 INMTO95050 263 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 CST1P01037 141 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 CHRNA1P02708 482 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 CES1P23141 567 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 ADCYAP1R1P41586 468 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 HNRNPFP52597 415 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 ISL1P61371 349 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 NRG1Q02297 640 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 NDUFA5Q16718 116 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 PHKG1Q16816 387 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 CTU2Q2VPK5 515 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 ATP6AP1LQ52LC2 224 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 SIRPB2Q5JXA9 342 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 C6orf136Q5SQH8 315 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 MFSD4AQ8N468 514 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 FNDC5Q8NAU1 212 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 OR56A4Q8NGH8 313 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 PHF10Q8WUB8 498 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 RORBQ92753 470 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 POP5Q969H6 163 aaKnown RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 SMURF2Q9HAU4 748 aa14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 MAGED1Q9Y5V3 778 aaPredicted RBP14.65□□□□□ -0.06
CACNA1A-220ENST00000635988 LCHNA4D1U4 455 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 NADKO95544 446 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 GOT2P00505 430 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 MMP3P08254 477 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 IL12AP29459 219 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 RAD51Q06609 339 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 PWP1Q13610 501 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF691Q5VV52 312 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 NECAB2Q7Z6G3 386 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 SYVN1Q86TM6 617 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ADCK1Q86TW2 530 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ADHFE1Q8IWW8 467 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 EID3Q8N140 333 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 OR6Q1Q8NGQ2 317 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 OTUD5Q96G74 571 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 CCDC90BQ9GZT6 254 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ANKHQ9HCJ1 492 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ABCC13Q9NSE7 274 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 SPATA7Q9P0W8 599 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ORC6Q9Y5N6 252 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 A0A1B0GTL3 188 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 E9PAM4 449 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 M0QX08 132 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 CCL22O00626 93 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 PTGESO14684 152 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 GSTA4O15217 222 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 CNTN5O94779 1100 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 PEX11BO96011 259 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 NR4A1P22736 598 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 GSSP48637 474 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 KPNA1P52294 538 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 KCNJ8Q15842 424 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ZC3H12BQ5HYM0 836 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ARRDC4Q8NCT1 418 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 OR52E4Q8NGH9 312 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 CCDC97Q96F63 343 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 PPM1MQ96MI6 270 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 CTRCQ99895 268 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 HGH1Q9BTY7 390 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 CPNE5Q9HCH3 593 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 HEBP1Q9NRV9 189 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 TAS2R13Q9NYV9 303 aa14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 ERVK-11Q9UQG0 969 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms