RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SMG5Q9UPR3 1016 aaKnown RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 TMEM98Q9Y2Y6 226 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 PSAT1Q9Y617 370 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 SPAG17Q6Q759 2223 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 SDK1Q7Z5N4 2213 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 THADAQ6YHU6 1953 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 UBA6A0AVT1 1052 aaPredicted RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 CFAP99D6REC4 459 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 PROB1E7EW31 1015 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 S1PR4O95977 384 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 RALBP11234 206 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 MYCLP1P12525 358 aaPredicted RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 CD38P28907 300 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 ABCG1P45844 678 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 RABIFP47224 123 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 THOP1P52888 689 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 PFN3P60673 137 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 NAB1Q13506 487 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 TYSND1Q2T9J0 566 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 GALNTL6Q49A17 601 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 KHDC1Q4VXA5 237 aaKnown RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 ZNF789Q5FWF6 425 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 KIAA0408Q6ZU52 694 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 MARK2Q7KZI7 788 aaKnown RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 DET1Q7L5Y6 550 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 CCDC91Q7Z6B0 441 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 ABI3BPQ7Z7G0 1075 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 LRRC6Q86X45 466 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 PARP9Q8IXQ6 854 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 RBFAQ8N0V3 343 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 NAT14Q8WUY8 206 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 CCDC97Q96F63 343 aaPredicted RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 KLHDC7BQ96G42 594 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 COX14Q96I36 57 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 MAGEB18Q96M61 343 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 OR2AG1Q9H205 316 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 VPS9D1Q9Y2B5 631 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 CRYL1Q9Y2S2 319 aa14.27□□□□□ -0.12
LINC00339-208ENST00000634934 OAS3Q9Y6K5 1087 aaKnown RBP14.27□□□□□ -0.12
LINC00339-208ENST00000634934 ZNF106Q9H2Y7 1883 aaKnown RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 BCAT2O15382 392 aaPredicted RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 HAUS5O94927 633 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 AHSGP02765 367 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 THEGLP0DJG4 465 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF7P17097 686 aaPredicted RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 HTR1BP28222 390 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 PLA2G5P39877 138 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 MSH2P43246 934 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 LEPRP48357 1165 aaKnown RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 CD151P48509 253 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 YPEL5P62699 121 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 B4GALNT1Q00973 533 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 NFATC4Q14934 902 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 SNCBQ16143 134 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 LAYNQ6UX15 382 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 SLC26A11Q86WA9 606 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 C1orf216Q8TAB5 229 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 HEXDCQ8WVB3 486 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 PIGKQ92643 395 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 FAM122AQ96E09 287 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 ATXN7L3BQ96GX2 97 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 CPNE1Q99829 537 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 ZCCHC2Q9C0B9 1178 aaKnown RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 CLPBQ9H078 707 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 INTS10Q9NVR2 710 aaKnown RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 MOSPD1Q9UJG1 213 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 IKBKGQ9Y6K9 419 aa14.26□□□□□ -0.13
LINC00339-208ENST00000634934 TNRC6BQ9UPQ9 1833 aaKnown RBP14.26□□□□□ -0.13
LINC00339-208ENST00000634934 A0A1W2PR77 199 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TLDC2A0PJX2 215 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TMEM202A6NGA9 273 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TOR1BO14657 336 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 PRPF4O43172 522 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 FAM155BO75949 473 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 CDK14O94921 469 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 LMNAP02545 664 aaKnown RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 WNT1P04628 370 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 INHBAP08476 426 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 HOXC4P09017 264 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 GNSP15586 552 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 GABRB3P28472 473 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 FMO4P31512 558 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 NSG1P42857 185 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 POLD2P49005 469 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 KIAA1024LP59773 190 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TMEM115Q12893 351 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 GTF2H3Q13889 308 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 TPRG1LQ5T0D9 272 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 CNSTQ6PJW8 725 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 ENPP7Q6UWV6 458 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 PACS1Q6VY07 963 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 ADGRG6Q86SQ4 1221 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 CLDN19Q8N6F1 224 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 MFSD2AQ8NA29 543 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 FAM174AQ8TBP5 190 aa14.25□□□□□ -0.13
LINC00339-208ENST00000634934 SCG3Q8WXD2 468 aaKnown RBP14.25□□□□□ -0.13
LINC00339-208ENST00000634934 LPGAT1Q92604 370 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms