RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ATP1A1P05023 1023 aaKnown RBP15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 TEAD1P28347 426 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 TSPAN7P41732 249 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 GEMP55040 296 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 WNT3AP56704 352 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 SRSF1Q07955 248 aaKnown RBP eCLIP15.37■□□□□ 0.051e-8■■■□□ 14.7
SNRNP48-203ENST00000634363 MPP3Q13368 585 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 NFATC2Q13469 925 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 IGFBP7Q16270 282 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 QPCTQ16769 361 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 ADAMTSL4Q6UY14 1074 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 C1orf54Q8WWF1 131 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 KIAA1143Q96AT1 154 aaPredicted RBP15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 LRRC45Q96CN5 670 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 SCARF2Q96GP6 870 aaPredicted RBP15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 CATSPER2Q96P56 530 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 TRIB3Q96RU7 358 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 RIOK2Q9BVS4 552 aaKnown RBP15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 EPN3Q9H201 632 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 KLHL3Q9UH77 587 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 PILRAQ9UKJ1 303 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 ZNF148Q9UQR1 794 aa15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 AAR2Q9Y312 384 aaKnown RBP15.37■□□□□ 0.05
SNRNP48-203ENST00000634363 C1orf232A0A0U1RR37 186 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 C5orf60A6NFR6 353 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 SNX2O60749 519 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 PSMB4P28070 264 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 STIP1P31948 543 aaKnown RBP15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 FASLGP48023 281 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 RAB15P59190 212 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 GNG11P61952 73 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 HHEXQ03014 270 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 SNX1Q13596 522 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 C16orf46Q6P387 395 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 KDELC1Q6UW63 502 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 NLGN4XQ8N0W4 816 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 NLGN4YQ8NFZ3 816 aaPredicted RBP15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 RTP4Q96DX8 246 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 RNF31Q96EP0 1072 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 OXNAD1Q96HP4 312 aaPredicted RBP15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 TEFMQ96QE5 360 aaKnown RBP15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 LYSMD1Q96S90 227 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 NAP1L3Q99457 506 aaPredicted RBP15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 APMAPQ9HDC9 416 aa15.36■□□□□ 0.05
SNRNP48-203ENST00000634363 BOD1L1Q8NFC6 3051 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 LOC101059948A0A1B0GTJ6 334 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 CAPN5O15484 640 aaPredicted RBP15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 IFNB1P01574 187 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 EPOP01588 193 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 HLA-DPA1P20036 260 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 MAP4P27816 1152 aaKnown RBP15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 GDF10P55107 478 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 MC2RQ01718 297 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 OASLQ15646 514 aaKnown RBP15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 CCNG2Q16589 344 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 DEFB109BQ30KR1 87 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 P3H1Q32P28 736 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 CEACAM20Q6UY09 585 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 TIPARPQ7Z3E1 657 aaKnown RBP15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 SFRP1Q8N474 314 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 BMPERQ8N8U9 685 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 CCDC89Q8N998 374 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 SLC45A3Q96JT2 553 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 MRGPRX2Q96LB1 330 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 SRPK1Q96SB4 655 aaKnown RBP15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 STN1Q9H668 368 aaKnown RBP15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 HOMER3Q9NSC5 361 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 TUBD1Q9UJT1 453 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 KCNK6Q9Y257 313 aa15.35■□□□□ 0.05
SNRNP48-203ENST00000634363 PGRMC1O00264 195 aaKnown RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 CLDN7O95471 211 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 SLC4A1P02730 911 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 PYGLP06737 847 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 STC1P52823 247 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 LRP8Q14114 963 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 UBAP2LQ14157 1087 aaKnown RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 SIX1Q15475 284 aaPredicted RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 PARP6Q2NL67 630 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 WDR74Q6RFH5 385 aaPredicted RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 ARHGAP22Q7Z5H3 698 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 SLC25A41Q8N5S1 370 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 C9orf43Q8TAL5 461 aaPredicted RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 OSBPL9Q96SU4 736 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 FICDQ9BVA6 458 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 GPR63Q9BZJ6 419 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 ZFYVE1Q9HBF4 777 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 PKD2L2Q9NZM6 624 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 PDP2Q9P2J9 529 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 TBC1D29Q9UFV1 150 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 SNX12Q9UMY4 172 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 ZNF711Q9Y462 761 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 PCYT1BQ9Y5K3 369 aaPredicted RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 OAS3Q9Y6K5 1087 aaKnown RBP15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 NAV2Q8IVL1 2488 aa15.34■□□□□ 0.05
SNRNP48-203ENST00000634363 LOC285095A0A1B0GVY8 99 aa15.33■□□□□ 0.04
SNRNP48-203ENST00000634363 POLR1CO15160 346 aaPredicted RBP15.33■□□□□ 0.04
SNRNP48-203ENST00000634363 DNAJC6O75061 913 aa15.33■□□□□ 0.04
SNRNP48-203ENST00000634363 STK17BO94768 372 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms