RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 UBP1Q9NZI7 540 aa18.63■□□□□ 0.57
SMN2-215ENST00000628696 TMPRSS11EQ9UL52 423 aa18.63■□□□□ 0.57
SMN2-215ENST00000628696 PADI1Q9ULC6 663 aa18.63■□□□□ 0.57
SMN2-215ENST00000628696 SPO11Q9Y5K1 396 aa18.63■□□□□ 0.57
SMN2-215ENST00000628696 MTSS1O43312 755 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 NDST3O95803 873 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 FGF5P12034 268 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 HALP42357 657 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 DYNLT1P63172 113 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 TMEM115Q12893 351 aaPredicted RBP18.62■□□□□ 0.57
SMN2-215ENST00000628696 ATP13A5Q4VNC0 1218 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 ODF2Q5BJF6 829 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 AGAP9Q5VTM2 703 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 SLC9A4Q6AI14 798 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 WASH2PQ6VEQ5 465 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 PPP1R3BQ86XI6 285 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 RBM12BQ8IXT5 1001 aaKnown RBP18.62■□□□□ 0.57
SMN2-215ENST00000628696 KLHL6Q8WZ60 621 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 SRPK1Q96SB4 655 aaKnown RBP18.62■□□□□ 0.57
SMN2-215ENST00000628696 GLOD4Q9HC38 313 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 WASH6PQ9NQA3 447 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 IFNKQ9P0W0 207 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 WDR37Q9Y2I8 494 aa18.62■□□□□ 0.57
SMN2-215ENST00000628696 LRRK2Q5S007 2527 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 GOLGA6L19H0YKK7 550 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 CREG1O75629 220 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 MT-ND3P03897 115 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 KRT1P04264 644 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 TNNT1P13805 278 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 NELFEP18615 380 aaKnown RBP18.61■□□□□ 0.57
SMN2-215ENST00000628696 MLLT10P55197 1068 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 PPP1CAP62136 330 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 DNASE1L3Q13609 305 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 SLC18A3Q16572 532 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 ASB18Q6ZVZ8 466 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 SIDT2Q8NBJ9 832 aaKnown RBP18.61■□□□□ 0.57
SMN2-215ENST00000628696 CT55Q8WUE5 264 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 RNF25Q96BH1 459 aaPredicted RBP18.61■□□□□ 0.57
SMN2-215ENST00000628696 TADA1Q96BN2 335 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 VPS35Q96QK1 796 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 DEF6Q9H4E7 631 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 PDE7BQ9NP56 450 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 TLK1Q9UKI8 766 aa18.61■□□□□ 0.57
SMN2-215ENST00000628696 TNRC6AQ8NDV7 1962 aaKnown RBP18.61■□□□□ 0.57
SMN2-215ENST00000628696 A0A0A6YYK5 440 aaPredicted RBP18.6■□□□□ 0.57
SMN2-215ENST00000628696 SYCE3A1L190 88 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 C3orf70A6NLC5 250 aaPredicted RBP18.6■□□□□ 0.57
SMN2-215ENST00000628696 ZNF487B1APH4 448 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 RFPL1O75677 317 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 TIAF1O95411 115 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 TMEM253P0C7T8 217 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 GP1BBP13224 206 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 ZFXP17010 805 aaPredicted RBP18.6■□□□□ 0.57
SMN2-215ENST00000628696 KCNAB1Q14722 419 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 NOMO1Q15155 1222 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 SLC14A2Q15849 920 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMN2-215ENST00000628696 TEX44Q53QW1 395 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 TCTN3Q6NUS6 607 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 CYB5D1Q6P9G0 228 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 C11orf96Q7Z7L8 435 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 ATCAYQ86WG3 371 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 FAM26EQ8N5C1 309 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 SLC35G2Q8TBE7 412 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 BRSK1Q8TDC3 778 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 OLFM3Q96PB7 478 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 LHX9Q9NQ69 397 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 EPHA6Q9UF33 1036 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 RARRES3Q9UL19 164 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 PSMD13Q9UNM6 376 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 MAN2B2Q9Y2E5 1009 aa18.6■□□□□ 0.57
SMN2-215ENST00000628696 RELNP78509 3460 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 IGHV5-51A0A0C4DH38 117 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 POP7O75817 140 aaKnown RBP18.59■□□□□ 0.57
SMN2-215ENST00000628696 FOLR1P15328 257 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 ARL4DP49703 201 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 TUBB3Q13509 450 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 AMZ2Q86W34 360 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 SLC25A41Q8N5S1 370 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 MIB2Q96AX9 1013 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 RAB33BQ9H082 229 aa18.59■□□□□ 0.57
SMN2-215ENST00000628696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMN2-215ENST00000628696 CLEC18AA5D8T8 446 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 AKR1B10O60218 316 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 UGT1A9O60656 530 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 KCNJ13O60928 360 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 NTRK1P04629 796 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 UGT1A6P19224 532 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 UGT1A1P22309 533 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 UGT1A4P22310 534 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 FECHP22830 423 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 PTPN3P26045 913 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 HNRNPH3P31942 346 aaKnown RBP18.58■□□□□ 0.56
SMN2-215ENST00000628696 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
SMN2-215ENST00000628696 PMS2P54278 862 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 PLCL1Q15111 1095 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 CHRNA6Q15825 494 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 RPE65Q16518 533 aa18.58■□□□□ 0.56
SMN2-215ENST00000628696 PPP2R5EQ16537 467 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms