RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TCN1P20061 433 aaPredicted RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 DNAJB2P25686 324 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 EEF1DP29692 281 aaKnown RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 ARCN1P48444 511 aaKnown RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 TAS2R39P59534 338 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 DENND5AQ6IQ26 1287 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 PGAM4Q8N0Y7 254 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 EID3Q8N140 333 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 KDM1BQ8NB78 822 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 FAM156AQ8NDB6 213 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 TMEM80Q96HE8 168 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 MAGED4Q96JG8 741 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ELMO2Q96JJ3 720 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 PAAF1Q9BRP4 392 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 WACQ9BTA9 647 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 TRPV6Q9H1D0 765 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ERVMER34-1Q9H9K5 563 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ZBTB26Q9HCK0 441 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ENOPH1Q9UHY7 261 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 AAR2Q9Y312 384 aaKnown RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 FIS1Q9Y3D6 152 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 PDCD11Q14690 1871 aaKnown RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 PLK4O00444 970 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 CACNG3O60359 315 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 ATG13O75143 517 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 SLITRK5O94991 958 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 HNRNPLP14866 589 aaKnown RBP eCLIP12.34□□□□□ -0.43
LITAF-221ENST00000622633 ARSAP15289 507 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 EPHX2P34913 555 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 YIF1BQ5BJH7 314 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 HEXDCQ8WVB3 486 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 TSGA13Q96PP4 275 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 EFCAB1Q9HAE3 211 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 GLOD4Q9HC38 313 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 TCAF2A6NFQ2 919 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 C2orf81A6NN90 581 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 TOR1AO14656 332 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 S100A6P06703 90 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 RETP07949 1114 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 ME2P23368 584 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 GRIK1P39086 918 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 SLC1A2P43004 574 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 CHRNA4P43681 627 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 SQLEQ14534 574 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 UGP2Q16851 508 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 RNF135Q8IUD6 432 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 ARHGAP12Q8IWW6 846 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 ATPAF2Q8N5M1 289 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 PNPLA1Q8N8W4 532 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 OR13F1Q8NGS4 319 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 PDCD6IPQ8WUM4 868 aaKnown RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 MYLPFQ96A32 169 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 MTG1Q9BT17 334 aaPredicted RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 BTBD2Q9BX70 525 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 RPRD1BQ9NQG5 326 aaKnown RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 DUS2Q9NX74 493 aaKnown RBP12.34□□□□□ -0.43
LITAF-221ENST00000622633 TAS2R7Q9NYW3 318 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 GTSE1Q9NYZ3 720 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 VPS28Q9UK41 221 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
LITAF-221ENST00000622633 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.43
LITAF-221ENST00000622633 SLC22A2O15244 555 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 HNF1BP35680 557 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 TNK2Q07912 1038 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 GALNT3Q14435 633 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 PAN2Q504Q3 1202 aaKnown RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 ESCO2Q56NI9 601 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 CNSTQ6PJW8 725 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 GATAD2AQ86YP4 633 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 CNTN4Q8IWV2 1026 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 FCRL5Q96RD9 977 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 GDF15Q99988 308 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 CYP4F12Q9HCS2 524 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
LITAF-221ENST00000622633 SIRT5Q9NXA8 310 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 MAN2B2Q9Y2E5 1009 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 TCAF1Q9Y4C2 921 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 PTCH2Q9Y6C5 1203 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 C17orf102A2RUQ5 167 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 KCNU1A8MYU2 1149 aa12.33□□□□□ -0.44
LITAF-221ENST00000622633 HAS3O00219 553 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms