RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TMEM220Q6QAJ8 160 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ZDHHC24Q6UX98 284 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 TAS2R42Q7RTR8 314 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CTAGE6Q86UF2 777 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 SLCO6A1Q86UG4 719 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 C17orf82Q86X59 251 aaPredicted RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 TRAPPC5Q8IUR0 188 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CTAGE4Q8IX94 777 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CLDN19Q8N6F1 224 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 KYQ8NBH2 561 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 LRRN4CLQ8ND94 238 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 FAM46DQ8NEK8 389 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 PATE1Q8WXA2 126 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ZNF669Q96BR6 464 aaPredicted RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 STAMBPL1Q96FJ0 436 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 TTC25Q96NG3 672 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 EBNA1BP2Q99848 306 aaKnown RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 L2HGDHQ9H9P8 463 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 SIRPGQ9P1W8 387 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 DMGDHQ9UI17 866 aaKnown RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ANAPC5Q9UJX4 755 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 UTP11Q9Y3A2 253 aaKnown RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 TEX264Q9Y6I9 313 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 PRSS21Q9Y6M0 314 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 KMOO15229 486 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 ZNF7P17097 686 aaPredicted RBP14.09□□□□□ -0.15
CBWD3-217ENST00000621474 CKMT2P17540 419 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 ACP1P24666 158 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 PRLHRP49683 370 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 DRG2P55039 364 aaKnown RBP14.09□□□□□ -0.15
CBWD3-217ENST00000621474 SIM1P81133 766 aaPredicted RBP14.09□□□□□ -0.15
CBWD3-217ENST00000621474 HIF1AQ16665 826 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 ZNF658BQ4V348 819 aaPredicted RBP14.09□□□□□ -0.15
CBWD3-217ENST00000621474 BCL7AQ4VC05 210 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 PACS1Q6VY07 963 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 UNC5BQ8IZJ1 945 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 PDIK1LQ8N165 341 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 ARL10Q8N8L6 244 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 FBXO25Q8TCJ0 367 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 ART4Q93070 314 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 TIMM29Q9BSF4 260 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 CARD6Q9BX69 1037 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 RAB17Q9H0T7 212 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 DPEP2Q9H4A9 486 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 KLC4Q9NSK0 619 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 CATSPERZQ9NTU4 200 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 SAMD15Q9P1V8 674 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 TBC1D29Q9UFV1 150 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 MAD1L1Q9Y6D9 718 aa14.09□□□□□ -0.15
CBWD3-217ENST00000621474 EME2A4GXA9 379 aaPredicted RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 ESPNB1AK53 854 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 B4DGG1 531 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 CASC3O15234 703 aaKnown RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 CD3EAPO15446 510 aaKnown RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 FTH1P19P0C7X4 201 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 PGAM1P18669 254 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 ELK3P41970 407 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 CLCNKAP51800 687 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 DMPKQ09013 629 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 GTF2H3Q13889 308 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 ITIH4Q14624 930 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 CRYMQ14894 314 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 INSCQ1MX18 579 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 BBS9Q3SYG4 887 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 FASTKD1Q53R41 847 aaKnown RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 HP1BP3Q5SSJ5 553 aaPredicted RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 GUSBP11Q6P575 273 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 FAM83HQ6ZRV2 1179 aaPredicted RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 BBOF1Q8ND07 529 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 LINC00615Q96LM1 132 aaPredicted RBP14.08□□□□□ -0.15
CBWD3-217ENST00000621474 DNAJC16Q9Y2G8 782 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 FAM169AQ9Y6X4 670 aa14.08□□□□□ -0.15
CBWD3-217ENST00000621474 UNC13CQ8NB66 2214 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 POP7O75817 140 aaKnown RBP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 F7P08709 466 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 BRAFP15056 766 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 NSG1P42857 185 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 CALCOCO2Q13137 446 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 NFE2L1Q14494 772 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 HLTFQ14527 1009 aaKnown RBP eCLIP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 TYSND1Q2T9J0 566 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 DNAJC21Q5F1R6 531 aaKnown RBP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 CERS6Q6ZMG9 384 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 DGLUCYQ7Z3D6 616 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 LILRA3Q8N6C8 439 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 CEP112Q8N8E3 955 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 GPR150Q8NGU9 434 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 ZDHHC1Q8WTX9 485 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 HEXDCQ8WVB3 486 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 SCG3Q8WXD2 468 aaKnown RBP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 ZNF514Q96K75 400 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-217ENST00000621474 PRDM8Q9NQV8 689 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 ZDHHC18Q9NUE0 388 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 RABGEF1Q9UJ41 708 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 CHMP2BQ9UQN3 213 aa14.08□□□□□ -0.16
CBWD3-217ENST00000621474 RALBP11234 206 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 PLTPP55058 493 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 MAZP56270 477 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms