RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 EIF2B4Q9UI10 523 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-205ENST00000617641 UBDO15205 165 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 CIB2O75838 187 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 NUDT2P50583 147 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 B4GALNT1Q00973 533 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 ARHGEF7Q14155 803 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 FRA10AC1Q70Z53 315 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZBTB2Q8N680 514 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 BPIFB1Q8TDL5 484 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 ASB16Q96NS5 453 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 C1QTNF3Q9BXJ4 246 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 IL36AQ9UHA7 158 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 SLC8A2Q9UPR5 921 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 PIKFYVEQ9Y2I7 2098 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 OTOL1A6NHN0 477 aaPredicted RBP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 PIP5K1BO14986 540 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 KRT36O76013 467 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 PDE5AO76074 875 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 PRDX3P30048 256 aaKnown RBP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 RGS4P49798 205 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 C18orf21Q32NC0 220 aaPredicted RBP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 GPRC6AQ5T6X5 926 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 LARP4Q71RC2 724 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 HSD11B1LQ7Z5J1 315 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 NET1Q7Z628 596 aaPredicted RBP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 ADAMTSL2Q86TH1 951 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 FGF13Q92913 245 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 RCN3Q96D15 328 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 PANX3Q96QZ0 392 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 COPS8Q99627 209 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 SFXN1Q9H9B4 322 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 PCDH12Q9NPG4 1184 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 NUDT4Q9NZJ9 180 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 TMPRSS11EQ9UL52 423 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 TMCO1Q9UM00 188 aa17.12■□□□□ 0.33
PCDHGC3-205ENST00000617641 GPC4O75487 556 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 SORBS2O94875 1100 aaKnown RBP17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 TIMP2P16035 220 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 VIPR1P32241 457 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 NSG1P42857 185 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 SLC6A11P48066 632 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 ERFP50548 548 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 HERC3Q15034 1050 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 RIPOR1Q6ZS17 1223 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 SYVN1Q86TM6 617 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 MYO1HQ8N1T3 1032 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 EFCAB3Q8N7B9 438 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 ENDOVQ8N8Q3 282 aaKnown RBP17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 HMGCLL1Q8TB92 370 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 HGH1Q9BTY7 390 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 TUBB1Q9H4B7 451 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 GIMAP2Q9UG22 337 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 ADAMTS6Q9UKP5 1117 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 BTRCQ9Y297 605 aa17.11■□□□□ 0.33
PCDHGC3-205ENST00000617641 UPK3BL1B0FP48 263 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 UPK3BL2E5RIL1 263 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 E2F3O00716 465 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SRPRAP08240 638 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 DGKAP23743 735 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 FSHRP23945 695 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 RBBP7Q16576 425 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 GK5Q6ZS86 529 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 ETFBKMTQ8IXQ9 262 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 DDIASQ8IXT1 998 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SNX31Q8N9S9 440 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 WFIKKN2Q8TEU8 576 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SMARCD2Q92925 531 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SPATA16Q9BXB7 569 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 DCLRE1BQ9H816 532 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 AKTIPQ9H8T0 292 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SPATS2LQ9NUQ6 558 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZNF225Q9UK10 706 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 TIMM22Q9Y584 194 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 REV3LO60673 3130 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 PRRT4C9JH25 899 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 CRCPO75575 148 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 ASLP04424 464 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 CYP2A6P11509 494 aaPredicted RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 TBL3Q12788 808 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SQLEQ14534 574 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 TRMT5Q32P41 509 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 C1orf146Q5VVC0 180 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZDHHC20Q5W0Z9 365 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SCAMP4Q969E2 229 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 ELOVL2Q9NXB9 296 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 MBD1Q9UIS9 605 aaPredicted RBP17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 SLC27A6Q9Y2P4 619 aa17.1■□□□□ 0.33
PCDHGC3-205ENST00000617641 TSPAN11A1L157 253 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 EPOPA6NHQ4 379 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 HEPACAM2A8MVW5 462 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 LMNAP02545 664 aaKnown RBP17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 LINC00032P0C843 101 aa17.09■□□□□ 0.33
PCDHGC3-205ENST00000617641 ZNF30P17039 623 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms