RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 HNRNPKP61978 463 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 C1orf61Q13536 156 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 CSRP2Q16527 193 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 KBTBD12Q3ZCT8 623 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 EMBQ6PCB8 327 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 CNSTQ6PJW8 725 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 KIAA0408Q6ZU52 694 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 LRRTM4Q86VH4 590 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF547Q8IVP9 402 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 BEND7Q8N7W2 519 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 PPM1NQ8N819 430 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 LPGAT1Q92604 370 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF514Q96K75 400 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 OR2M4Q96R27 311 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 TMEM168Q9H0V1 697 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 TM7SF3Q9NS93 570 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 APOBEC3BQ9UH17 382 aaKnown RBP15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 RABGEF1Q9UJ41 708 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 GPR34Q9UPC5 381 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 VPS9D1Q9Y2B5 631 aa15.4■□□□□ 0.06
PCDHGC3-204ENST00000617222 A0A087WUV0 522 aaPredicted RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 A0A1B0GTQ1 180 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 LNP1A1A4G5 178 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 H3BM21 787 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 KMOO15229 486 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 CTIFO43310 598 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 DFNA5O60443 496 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 SDC3O75056 442 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 CER1O95813 267 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 OR56A5P0C7T3 313 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 TGM1P22735 817 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 RPS3P23396 243 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 PI4KAP42356 2102 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 ABCG1P45844 678 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 LEPRP48357 1165 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 IL9RQ01113 521 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 BNIP3Q12983 259 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 EFTUD2Q15029 972 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 SHBQ15464 509 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 PLA2G4EQ3MJ16 856 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 BCL7AQ4VC05 210 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 PTRHD1Q6GMV3 140 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 CHST15Q7LFX5 561 aaPredicted RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 STRA8Q7Z7C7 330 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 LRRC6Q86X45 466 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 MINDY1Q8N5J2 469 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 LMX1AQ8TE12 382 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 UBLCP1Q8WVY7 318 aaPredicted RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 MRRFQ96E11 262 aaKnown RBP15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 CYTH2Q99418 400 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 FUT8Q9BYC5 575 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 P2RY12Q9H244 342 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 NSMCE4AQ9NXX6 385 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 SPASTQ9UBP0 616 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 SLC23A2Q9UGH3 650 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 PSAT1Q9Y617 370 aa15.39■□□□□ 0.05
PCDHGC3-204ENST00000617222 ZNF106Q9H2Y7 1883 aaKnown RBP15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 IQCF5A8MTL0 148 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 PIAS2O75928 621 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 ABHD2P08910 425 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 ACP5P13686 325 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 PKMP14618 531 aaKnown RBP15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 ITGB6P18564 788 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 PBLDP30039 288 aaPredicted RBP15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 CD151P48509 253 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 PRLHRP49683 370 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 CTBSQ01459 385 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 SLC29A2Q14542 456 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 PRRT3Q5FWE3 981 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 CTSL3PQ5NE16 218 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 C11orf96Q7Z7L8 435 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 GALNT7Q86SF2 657 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 SLC26A11Q86WA9 606 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCL4L1Q8NHW4 92 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 CAVIN3Q969G5 261 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 BIRC8Q96P09 236 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 LRRC61Q9BV99 259 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 EPB41L4BQ9H329 900 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 ACSS3Q9H6R3 686 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 RXFP3Q9NSD7 469 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 TRNAU1APQ9NX07 287 aaKnown RBP15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 GNPTGQ9UJJ9 305 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 PCDHB1Q9Y5F3 818 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 DNMT3AQ9Y6K1 912 aaPredicted RBP15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 CACNA1EQ15878 2313 aa15.38■□□□□ 0.05
PCDHGC3-204ENST00000617222 OTOGLQ3ZCN5 2332 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 F8W8V4 182 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 QSOX1O00391 747 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 TRIM16O95361 564 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 ESR1P03372 595 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 CELA2BP08218 269 aaPredicted RBP15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 AK4P27144 223 aaPredicted RBP15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCT8P50990 548 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 ADARP55265 1226 aaKnown RBP15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 BRD3Q15059 726 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 UAP1Q16222 522 aaPredicted RBP15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 INSCQ1MX18 579 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 AASDHQ4L235 1098 aaPredicted RBP15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 ZNF549Q6P9A3 640 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms