RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 RBP1P09455 135 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 MYL2P10916 166 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 ARRB2P32121 409 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 CCR7P32248 378 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 GPR1P46091 355 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 IL2P60568 153 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 KLC3Q6P597 504 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 FAM47EQ6ZV65 393 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 SYT13Q7L8C5 426 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 KBTBD6Q86V97 674 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 PHYKPLQ8IUZ5 450 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 RASGEF1AQ8N9B8 481 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 RHEBL1Q8TAI7 183 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 ZNF473Q8WTR7 871 aaKnown RBP14.07□□□□□ -0.16
USP39-220ENST00000613444 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 LINGO1Q96FE5 620 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 ATOH8Q96SQ7 321 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 OSBPL6Q9BZF3 934 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 TFB2MQ9H5Q4 396 aaKnown RBP14.07□□□□□ -0.16
USP39-220ENST00000613444 SPATS2LQ9NUQ6 558 aaKnown RBP14.07□□□□□ -0.16
USP39-220ENST00000613444 KCTD5Q9NXV2 234 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 KLHL42Q9P2K6 505 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 THEGQ9P2T0 379 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 MID2Q9UJV3 735 aa14.07□□□□□ -0.16
USP39-220ENST00000613444 KANSL1LA0AUZ9 987 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 C10orf142B7Z368 130 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 AP2A2O94973 939 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 OR56A5P0C7T3 313 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 MSH3P20585 1137 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 TPMTP51580 245 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 CTSCP53634 463 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 ATP6V0D1P61421 351 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 RPS21P63220 83 aaKnown RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 TMEM115Q12893 351 aaPredicted RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 GBX1Q14549 363 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 KIAA1161Q6NSJ0 714 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 PNCKQ6P2M8 343 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 KIAA1324Q6UXG2 1013 aaKnown RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 NAPRTQ6XQN6 538 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 OTOAQ7RTW8 1153 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 TRIM42Q8IWZ5 723 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 TP53I13Q8NBR0 393 aaPredicted RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 DCUN1D1Q96GG9 259 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 COX14Q96I36 57 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 FOXQ1Q9C009 403 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 ZNF395Q9H8N7 513 aaPredicted RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 PREBQ9HCU5 417 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 MBNL1Q9NR56 388 aaKnown RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 A0A1W2PQU0 124 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 NEMP2A6NFY4 417 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 CFAP99D6REC4 459 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 CDC7O00311 574 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 RNGTTO60942 597 aaKnown RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 RALBP11234 206 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 MTHFD2P13995 350 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 AOAHP28039 575 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 OCRLQ01968 901 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 LRRC32Q14392 662 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 MAP7D1Q3KQU3 841 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 ACSBG2Q5FVE4 666 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 CPLX4Q7Z7G2 160 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 ADGRG6Q86SQ4 1221 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 TRIM74Q86UV6 250 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 HORMAD1Q86X24 394 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 ZBTB2Q8N680 514 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 FLCNQ8NFG4 579 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 LENG8Q96PV6 779 aaPredicted RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 PANX3Q96QZ0 392 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 PITPNM3Q9BZ71 974 aa14.06□□□□□ -0.16
USP39-220ENST00000613444 USP36Q9P275 1121 aaKnown RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 MRPS17Q9Y2R5 130 aaKnown RBP14.06□□□□□ -0.16
USP39-220ENST00000613444 NDUFAB1O14561 156 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 TRIM13O60858 407 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 LILRB5O75023 590 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 PAK4O96013 591 aaPredicted RBP14.05□□□□□ -0.16
USP39-220ENST00000613444 SERPINE1P05121 402 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 NEFHP12036 1026 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 ACSL1P33121 698 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 DGKEP52429 567 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 PPP2CBP62714 309 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 PPP2CAP67775 309 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 UBXN2BQ14CS0 331 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 TSNQ15631 228 aaKnown RBP14.05□□□□□ -0.16
USP39-220ENST00000613444 LIPMQ5VYY2 423 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 NEK5Q6P3R8 708 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 CYHR1Q6ZMK1 362 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 FAM124AQ86V42 546 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 SIX5Q8N196 739 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 BEND7Q8N7W2 519 aaPredicted RBP14.05□□□□□ -0.16
USP39-220ENST00000613444 HMGB4Q8WW32 186 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 KLK6Q92876 244 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 GATA5Q9BWX5 397 aaPredicted RBP14.05□□□□□ -0.16
USP39-220ENST00000613444 KDM4CQ9H3R0 1056 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 ITM2CQ9NQX7 267 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 FBXL21Q9UKT6 434 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
USP39-220ENST00000613444 OR2AG2A6NM03 316 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms