RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CDKN2AIPNLQ96HQ2 116 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 TDRD1Q9BXT4 1180 aaKnown RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 ZYG11BQ9C0D3 744 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 GMNNO75496 209 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 CST1P01037 141 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 SLC2A4P14672 509 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 FDXRP22570 491 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 SIM2Q14190 667 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-216ENST00000610401 PSAPL1Q6NUJ1 521 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 GCNT7Q6ZNI0 430 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 OR6K2Q8NGY2 324 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 RHNO1Q9BSD3 238 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 PCDHB3Q9Y5E6 796 aa20.2■□□□□ 0.82
SSBP3-216ENST00000610401 OPRL1P41146 370 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 TRIM16LQ309B1 348 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 ZNF829Q3KNS6 432 aaPredicted RBP20.19■□□□□ 0.82
SSBP3-216ENST00000610401 GLT6D1Q7Z4J2 308 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 CROCCP3Q8IVE0 287 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 ARRDC2Q8TBH0 407 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 PROKR1Q8TCW9 393 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 PTCD2Q8WV60 388 aaKnown RBP20.19■□□□□ 0.82
SSBP3-216ENST00000610401 MIR1-1HGQ9H1L0 117 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 FARSBQ9NSD9 589 aaKnown RBP20.19■□□□□ 0.82
SSBP3-216ENST00000610401 TAS2R13Q9NYV9 303 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 PLXNA1Q9UIW2 1896 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 BBIP1A8MTZ0 92 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 SNAP91O60641 907 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 PLA2G16P53816 162 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 RPL38P63173 70 aaKnown RBP20.19■□□□□ 0.82
SSBP3-216ENST00000610401 RFTN2Q52LD8 501 aaPredicted RBP20.19■□□□□ 0.82
SSBP3-216ENST00000610401 C6orf136Q5SQH8 315 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 CCNYL2Q5T2Q4 361 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 LETMD1Q6P1Q0 360 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 CRTC3Q6UUV7 619 aa20.19■□□□□ 0.82
SSBP3-216ENST00000610401 FUBP1Q96AE4 644 aaKnown RBP20.19■□□□□ 0.82
SSBP3-216ENST00000610401 WDR90Q96KV7 1748 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 A0A1W2PQ67 120 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 TRIM43BA6NCK2 446 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 KCNQ1P51787 676 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 CHRNB3Q05901 458 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 RAD51Q06609 339 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 ZDHHC13Q8IUH4 622 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 IKZF5Q9H5V7 419 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 NTN4Q9HB63 628 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 FKBPLQ9UIM3 349 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 TCRBV5S2A0A599 114 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 MITFO75030 526 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-216ENST00000610401 THRBP10828 461 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 EFNA1P20827 205 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-216ENST00000610401 PBX3P40426 434 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 HK3P52790 923 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 TBC1D21Q8IYX1 336 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 GIPC2Q8TF65 315 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 SEPT5Q99719 369 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-216ENST00000610401 ADAM2Q99965 735 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 AFF4Q9UHB7 1163 aaKnown RBP20.18■□□□□ 0.82
SSBP3-216ENST00000610401 LEF1Q9UJU2 399 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-216ENST00000610401 PCDHGA11Q9Y5H2 935 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 A0A0C4DFX4 3053 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 SH3BGRLO75368 114 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 GPIP06744 558 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 OR1G1P47890 313 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 POLD2P49005 469 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 NKG7Q16617 165 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 TMEM236Q5W0B7 351 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 IGFN1Q86VF2 1251 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 SFRP1Q8N474 314 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 KRTCAP2Q8N6L1 136 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 ZBTB8BQ8NAP8 495 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-216ENST00000610401 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.18■□□□□ 0.821e-7■■■■■ 35.3
SSBP3-216ENST00000610401 NSMCE3Q96MG7 304 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 CSNK1G1Q9HCP0 422 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 VAPAQ9P0L0 249 aa20.18■□□□□ 0.82
SSBP3-216ENST00000610401 MROH6A6NGR9 719 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 G3V2T6 193 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 B4GALT3O60512 393 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 ADAM23O75077 832 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FMO3P31513 532 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 ERVPABLB-1P60509 514 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 IL5RAQ01344 420 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FAM117BQ6P1L5 589 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FRA10AC1Q70Z53 315 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 SPRED1Q7Z699 444 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 ZNF280BQ86YH2 543 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 THEM5Q8N1Q8 247 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 TMEM199Q8N511 208 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 CDC26Q8NHZ8 85 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FAM162AQ96A26 154 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 ACBD6Q9BR61 282 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 AARSD1Q9BTE6 412 aaKnown RBP20.17■□□□□ 0.82
SSBP3-216ENST00000610401 SMOC2Q9H3U7 446 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 ADGRE2Q9UHX3 823 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 SLC30A1Q9Y6M5 507 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 MYO1GB0I1T2 1018 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 H0Y858 1186 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 CHRNA1P02708 482 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FTH1P02794 183 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 IDUAP35475 653 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 MAP2K4P45985 399 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 GTF2H3Q13889 308 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms